Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J10
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    30   0.017
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    29   0.040
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.21 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.0  

>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 0.017
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 413 CACPSGYRLSEDGRSCIDID 472
           CACP G +L  DG  C++ D
Sbjct: 62  CACPDGLKLLSDGLMCVEKD 81


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 0.040
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 413 CACPSGYRLSEDGRSCID 466
           CACP G +L  DG  C++
Sbjct: 62  CACPDGLKLLSDGLMCVE 79


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 272 CYCKRGYRLGNDNRTCADVDECEEWSATRARGKLCIGECVNELGSYRC-ACPSGYRLSED 448
           C+CK GY+   + + C    EC             IG+  +E GS+ C ACP+  + S+ 
Sbjct: 247 CHCKPGYQADVEKQECT---ECP------------IGKFKHEAGSHSCEACPAHSKSSDY 291

Query: 449 G 451
           G
Sbjct: 292 G 292



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 371 LCIGECVNELGSYRCACPSGYRLSEDGRSCIDIDECETGE 490
           LC G+    L S  C C  GY+   + + C    EC  G+
Sbjct: 233 LCKGDGKWYLPSGGCHCKPGYQADVEKQEC---TECPIGK 269


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +1

Query: 385 MCQRTRQLSMRLPLWIST 438
           + ++ +++S+ +P WIST
Sbjct: 335 LLRKMQEMSIEVPYWIST 352


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 377 IGECVNELGSYRCACPSGYRLSEDGR 454
           I E +N+      A  SGY L+ DG+
Sbjct: 324 IREIMNKESRISAAIDSGYILNNDGK 349


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 377 IGECVNELGSYRCACPSGYRLSEDGR 454
           I E +N+      A  SGY L+ DG+
Sbjct: 324 IREIMNKESRISAAIDSGYILNNDGK 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,924
Number of Sequences: 438
Number of extensions: 3515
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)