Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J09
(348 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 93 4e-20
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 93 7e-20
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 70 4e-13
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 66 9e-12
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 59 8e-10
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 37 0.004
06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208... 33 0.062
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 32 0.14
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 31 0.33
08_01_0071 - 507595-507762,508027-508155,508567-508752,509306-50... 30 0.43
06_01_0227 - 1733119-1734099 29 0.76
04_04_1360 + 32889597-32890343 29 1.0
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 29 1.3
12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558... 28 2.3
06_03_0021 + 15520342-15520443,15522217-15522867,15522980-155231... 28 2.3
06_01_0446 - 3147007-3147111,3147215-3147367,3147445-3147497,314... 28 2.3
03_01_0257 + 1994645-1995061 28 2.3
02_01_0548 + 4035265-4035431,4035517-4035651,4035859-4036081,403... 28 2.3
05_06_0158 - 26054487-26054672,26054770-26055018,26056003-260566... 27 3.1
01_01_1192 + 9511961-9512977,9513860-9514078 27 4.0
10_08_0672 + 19762340-19762432,19762543-19762735,19763225-197632... 27 5.3
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120... 27 5.3
01_06_1718 - 39408179-39408427,39409102-39409217,39409460-394096... 27 5.3
11_03_0151 - 10816905-10816977,10817090-10817421,10817884-108179... 26 7.1
10_02_0111 + 5381779-5382117,5382775-5382798 26 7.1
06_03_0925 - 25992699-25992836,25992920-25993033,25993199-259933... 26 7.1
01_06_1365 - 36690267-36692222 26 7.1
09_02_0250 + 6266818-6267029,6267230-6267287,6267999-6268118,627... 26 9.3
07_03_1583 - 27898375-27898436,27898455-27898539,27898621-278987... 26 9.3
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 26 9.3
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 26 9.3
02_05_0428 + 28912746-28912971,28914132-28914301,28914462-289145... 26 9.3
01_06_1498 + 37788855-37788996,37789086-37789303,37789380-377898... 26 9.3
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 26 9.3
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 93.5 bits (222), Expect = 4e-20
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = +2
Query: 155 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 334
YF SY+ FGIH EML D+VRT YR+A+ N L G TVLD+GCGTGILS+FAAKAGA+
Sbjct: 256 YFGSYSSFGIHREMLGDKVRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAGAS 315
Query: 335 KVIA 346
+VIA
Sbjct: 316 RVIA 319
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 92.7 bits (220), Expect = 7e-20
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +2
Query: 77 SAASTPVAEDGPDKNVTAEE-MTSRD-YYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNK 250
SAAS P D A+ + D YF SY+H GIHE M+KD VRT YR+A+ H++
Sbjct: 20 SAASPPATGDSDAAAAAADAPLAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMHHQ 79
Query: 251 HLFKGKTVLDIGCGTGILSMFAAKAGATKVIA 346
+GK V+D+GCGTGILS+F A+AGA V A
Sbjct: 80 KFIEGKVVMDVGCGTGILSVFCARAGAKCVYA 111
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 70.1 bits (164), Expect = 4e-13
Identities = 38/96 (39%), Positives = 58/96 (60%)
Frame = +2
Query: 59 VAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAM 238
+A AAS + G V +E+ +Y F +Y++ +EML D VR Y +A+
Sbjct: 1 MASLPNGAASASASAAGGGPAVVDKEVDFANY-FCTYSYLYHQKEMLCDRVRMDAYHSAV 59
Query: 239 YHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIA 346
+ N H F+GK VLD+G G+GIL++++A+AGA KV A
Sbjct: 60 FRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYA 95
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 65.7 bits (153), Expect = 9e-12
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +2
Query: 125 TAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGIL 304
T E +S YF Y + ML+D VRT TY A+ N+ F+G+ V+D+G G+GIL
Sbjct: 161 TKIEASSAKMYFHYYGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGIL 220
Query: 305 SMFAAKAGATKVIA 346
S+FAA+AGA V A
Sbjct: 221 SLFAAQAGARHVYA 234
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 59.3 bits (137), Expect = 8e-10
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +2
Query: 155 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 334
YF +Y+H G+HEEMLK + LF + VLD+GCGTG+LS+F A AGA
Sbjct: 48 YFKAYSHIGVHEEMLKIVNENCDRKRGWMCP--LFLVEVVLDVGCGTGVLSIFCAFAGAA 105
Query: 335 KVIA 346
+V A
Sbjct: 106 RVYA 109
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 227 RNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKV 340
+N + + F+GK VL++GCG+G+ +FA GA+ V
Sbjct: 104 KNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGASTV 141
>06_03_0539 +
21919115-21919313,21919474-21919582,21920595-21920819,
21921140-21921239,21921782-21921865,21922000-21922058,
21922578-21922770
Length = 322
Score = 33.1 bits (72), Expect = 0.062
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 263 GKTVLDIGCGTGILSMFAAK 322
G+T+LD+GCG G LS++ AK
Sbjct: 134 GQTILDVGCGWGSLSLYIAK 153
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 260 KGKTVLDIGCGTGILSMFAAKAGAT 334
+G V+D+GCG GILS A+ GAT
Sbjct: 69 EGLKVIDVGCGGGILSEPLARMGAT 93
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 260 KGKTVLDIGCGTGILSMFAAKAGAT 334
+G ++D+GC G+LS A+ GAT
Sbjct: 267 EGLKIIDVGCAAGMLSEPLARMGAT 291
>05_01_0035 -
232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 YRNAMYHNKHLFKGKTVLDIGCGTGILSM-FAAKAGATKV 340
Y H +F+ KTV ++GCG G +S+ A K +KV
Sbjct: 106 YEGLNRHPDSIFRDKTVAELGCGNGWISIALAEKWSPSKV 145
>08_01_0071 -
507595-507762,508027-508155,508567-508752,509306-509381,
509477-509559,509778-509885,510420-510497,511762-511827
Length = 297
Score = 30.3 bits (65), Expect = 0.43
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +2
Query: 38 LEMESMDVAQESTS--AASTPV----AEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEML 199
L+ E++D +S A T V +EDG N T EE+T YY S+ +G EE+
Sbjct: 81 LQSEALDDPSQSHEKFAVGTKVQAVWSEDGEWYNATIEELTENGYYV-SFEGWGNKEEVD 139
Query: 200 KDEVRTL 220
VR+L
Sbjct: 140 PANVRSL 146
>06_01_0227 - 1733119-1734099
Length = 326
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 263 GKTVLDIGCGTGILSMFAAKAGAT 334
G TV D GCGTG L++ A GA+
Sbjct: 150 GATVCDAGCGTGSLAIPLASQGAS 173
>04_04_1360 + 32889597-32890343
Length = 248
Score = 29.1 bits (62), Expect = 1.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +2
Query: 44 MESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLT 223
ME M+V A+ VA G + + E RD D + L D L
Sbjct: 1 MEMMEVVATEIMDAALHVAVAG--RTLAVAE---RDGTHDPATGRALTGSWLWDSSLVLA 55
Query: 224 YRNAMYHNKHLFKGKTVLDIGCGTGILSMFA-AKAGATKVI 343
A + H +G TVL++G GTG+ + A A GA + +
Sbjct: 56 SHLASCVHHHHLRGATVLELGAGTGLPGIAAVACLGAARCV 96
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 236 MYHNKHLFKGKTVLDIGCGTGILSMFAAKAGA 331
++ + F TV+++G GT + + AAK GA
Sbjct: 73 VWQQRSRFTASTVVELGAGTSLPGLVAAKVGA 104
>12_02_0590 -
20853040-20853081,20853694-20853918,20854995-20855886,
20856120-20856122,20856284-20856513
Length = 463
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 41 EMESMDVAQESTSAASTPVAEDGPDKNVTAEEM 139
EM+S VA E+TS+ + V GP +T E +
Sbjct: 242 EMDSRVVAHETTSSLTNGVISSGPSAVITNESL 274
>06_03_0021 +
15520342-15520443,15522217-15522867,15522980-15523186,
15523698-15523913,15523992-15524214,15525052-15525299,
15525385-15525563,15525803-15526056,15526237-15526388
Length = 743
Score = 27.9 bits (59), Expect = 2.3
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +2
Query: 50 SMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYR 229
SMDV +T + + + D N +E S DS + + TL
Sbjct: 415 SMDVKASNTISPENSMVQTNQDVNT--KEYCSTQRTSDSSIIWRSPVDFPDARPETLQKT 472
Query: 230 NAMYHN--KHLFKGKTVLDIGCGTGILSMFAAKAGATKVI 343
++ H + + +G V+ G GTGI + F G ++
Sbjct: 473 KSVLHKLKQQIVEGTPVIGAGAGTGISAKFEEAGGVDLIV 512
>06_01_0446 -
3147007-3147111,3147215-3147367,3147445-3147497,
3147670-3147988,3148754-3148892,3149141-3149222,
3149711-3149789,3150135-3150314,3150811-3151070,
3151192-3151294,3151469-3151609,3151797-3151870,
3153536-3153635,3154108-3154167,3154381-3154428,
3154519-3154610,3155023-3155071,3155810-3155879,
3156408-3156505,3157288-3157347
Length = 754
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 263 GKTVLDIGCGTGILSMFAAKAGATKVI 343
GK V D GCG G LS+ ++ A V+
Sbjct: 30 GKVVADFGCGCGTLSVASSLLDAEHVV 56
>03_01_0257 + 1994645-1995061
Length = 138
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 59 VAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDS 166
+A S +AA+ AE G D N+TA ++ YF++
Sbjct: 1 MASSSAAAATYRCAECGADLNLTAAQLYPEGVYFEA 36
>02_01_0548 +
4035265-4035431,4035517-4035651,4035859-4036081,
4036282-4036468,4036627-4036811,4037435-4037572,
4037995-4038123
Length = 387
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 254 LFKGKTVLDIGCGTGILSMFAAKAGATKVI 343
L K + VLD+ C +G ++ AAK GA VI
Sbjct: 208 LSKDQRVLDLCCYSGGFALNAAKGGANNVI 237
>05_06_0158 -
26054487-26054672,26054770-26055018,26056003-26056611,
26056970-26056972
Length = 348
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 203 DEVRTLTYRNAMYHNKHLFKGKTVLDIGCG 292
+E R + Y + F GKTVL +GCG
Sbjct: 155 EEFRGSVIHTSAYKSGSKFAGKTVLVVGCG 184
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 230 NAMYHNKHLFKGKTVLDIGCG-TGILSMFAAKAGATKVIA 346
+A Y + FKG++VL +GCG +G + AG ++
Sbjct: 173 SADYRSAGAFKGRSVLVVGCGNSGFEIAYDLAAGGAAAVS 212
>10_08_0672 +
19762340-19762432,19762543-19762735,19763225-19763269,
19763381-19763432,19763601-19763704,19763887-19763987,
19764225-19764283,19764536-19764592,19764944-19764989,
19765187-19765266,19766841-19767096,19767210-19767405,
19768368-19768448,19768536-19768587,19768759-19768862,
19769586-19769686,19769924-19769982,19770491-19770536,
19770789-19770868,19770953-19771013
Length = 621
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 79 CCVDACR*RWSRQER 123
CC +AC RW R+ER
Sbjct: 269 CCSEACPPRWVREER 283
>02_01_0175 -
1198657-1198737,1199080-1199190,1199488-1199540,
1200131-1200215,1200519-1200614,1200729-1200821,
1201640-1201696,1201826-1201975,1202819-1202893
Length = 266
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 260 KGKTVLDIGCGTGILSMFAAKAGAT 334
+G VL+IG GTG L+ AGAT
Sbjct: 45 EGDVVLEIGPGTGSLTAALLDAGAT 69
>01_06_1718 -
39408179-39408427,39409102-39409217,39409460-39409603,
39409700-39410930,39411213-39411494
Length = 673
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 35 ILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTS 145
+L E VAQ++ S+ + +DGP + + AE M+S
Sbjct: 493 VLHSECNKVAQKAHSSVKQDITKDGP-RQIAAEIMSS 528
>11_03_0151 -
10816905-10816977,10817090-10817421,10817884-10817967,
10818045-10818092,10818233-10818287,10818378-10818433,
10818543-10818627,10819810-10819844
Length = 255
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 185 HEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTG 298
H E L++ ++ + A+ L KG VLD+GCG G
Sbjct: 14 HGETLRESLKRREHFLALQLG--LKKGMKVLDVGCGIG 49
>10_02_0111 + 5381779-5382117,5382775-5382798
Length = 120
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 269 TVLDIGCGTGILSMFAAKAGATKVIA 346
TVL+IG GTG L+ +AG V+A
Sbjct: 63 TVLEIGPGTGNLTKRLLQAGVKAVVA 88
>06_03_0925 -
25992699-25992836,25992920-25993033,25993199-25993310,
25993686-25993879,25994075-25994297,25994383-25994483,
25995108-25995137,25995182-25995337
Length = 355
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 263 GKTVLDIGCGTGILSMFAAKAGATKVI 343
G +LD+ CG+G+ + AK+G+ +
Sbjct: 183 GGVLLDVSCGSGLFTRKFAKSGSYSAV 209
>01_06_1365 - 36690267-36692222
Length = 651
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 14 RLFPVHKILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDS 166
RL P+ +LE + + S PV ED D + + +RDYY DS
Sbjct: 359 RLPPMMSVLEDTPATIVERSDG--QIPV-EDDADIDPPGGSLQTRDYYLDS 406
>09_02_0250 +
6266818-6267029,6267230-6267287,6267999-6268118,
6272359-6272511,6273381-6273586,6274280-6274733,
6276573-6276610,6276923-6277046,6277184-6277246,
6277350-6277412,6277526-6278152,6278267-6278294,
6278373-6278413,6278689-6278851,6278987-6279039,
6279217-6279262,6279373-6279444,6279578-6279741,
6279968-6280099,6280249-6280565,6280721-6280892,
6281009-6281107,6281275-6281349,6281446-6281504,
6281647-6281836,6281982-6282020
Length = 1255
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/68 (19%), Positives = 29/68 (42%)
Frame = +2
Query: 32 KILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEV 211
K+LE + +V + P DG D+N ++ S D + Y ++ + + +
Sbjct: 422 KVLEQGTSNVFDRPQYPFANPEISDGSDENFREDDTESDDDFDMDYVMLELYRKTIVQSM 481
Query: 212 RTLTYRNA 235
+ +N+
Sbjct: 482 KRKMKKNS 489
>07_03_1583 -
27898375-27898436,27898455-27898539,27898621-27898768,
27899009-27899028,27899135-27899236,27899743-27899812,
27899956-27900012,27902324-27902484,27902742-27902761,
27902997-27903069,27903077-27903169,27903456-27903496,
27903597-27903858
Length = 397
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 30 IKYLKWKVWMSPRKAPLLRRRLSLKMVP 113
I +LK K+W SPR+A R R++L P
Sbjct: 189 IAHLK-KMWFSPREARRERERVTLDNAP 215
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 257 FKGKTVLDIGCGTGILSMFAAK 322
F G T ++IG GTG++ + A+
Sbjct: 115 FNGVTAIEIGAGTGLVGLALAR 136
>03_06_0454 +
34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 122 RSCRDHLQRQASTQQRCF 69
R CR+HLQ S+QQ+ F
Sbjct: 269 RICREHLQEIISSQQKIF 286
>02_05_0428 +
28912746-28912971,28914132-28914301,28914462-28914566,
28915059-28915262,28915404-28915506,28915607-28915719
Length = 306
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 260 KGKTVLDIGCGTGILSMFAA-KAGA 331
K K+V+D+GCG G S + A K GA
Sbjct: 81 KPKSVVDVGCGIGGSSRYLANKYGA 105
>01_06_1498 +
37788855-37788996,37789086-37789303,37789380-37789819,
37789916-37790762
Length = 548
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 184 DAEMCIGIEIVISR---SHLLSSNVLVGTIFSDRRRRSRGA-FLGDIHTFHFKYFMY 26
DA +G+ + +S HLLSS +L+ I RR+ G+ F +++ H YF +
Sbjct: 448 DAVRSLGLALFLSIFGVGHLLSS-LLISVIDGATARRAGGSWFANNLNRAHLDYFYW 503
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 245 NKHLFKGKTVLDIGCGTGILSMFAAKAG 328
NK L + +VLDIG G+G LS AK G
Sbjct: 167 NKDL-RSCSVLDIGTGSGRLSQQLAKQG 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,852
Number of Sequences: 37544
Number of extensions: 196659
Number of successful extensions: 605
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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