Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J08
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    25   0.29 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.2  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   4.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   4.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   8.1  

>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 364 ISRKYEYYNLENQLKNLYQRLIN 432
           +S  Y Y N  N  K LY  +IN
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNIIN 340


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 306 LKEETTLFTLRESSVLRYSDLKKIRIL 386
           L+EE   F  + +  L+Y D+K++  L
Sbjct: 330 LREEINTFCPKNNKELKYDDIKEMEYL 356


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 KYEYYNLENQLKNLYQRLINYFNI 444
           KY  YN  N   N   + + Y+NI
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNI 113


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 352 LDIPISRKYEYY 387
           L++P SR  EYY
Sbjct: 218 LEVPASRNEEYY 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,427
Number of Sequences: 438
Number of extensions: 1848
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)