Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J06
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 26 0.23
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 25 0.31
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 25 0.31
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 0.71
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 22 3.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.8
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.8 bits (54), Expect = 0.23
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 134 PRMYRLLSLAVILVAVEACRPPPCHWSDGR 223
PR RLL V +++ C PP W D R
Sbjct: 179 PRRARLLVATVWILSFVICFPPLVGWKDKR 208
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 25.4 bits (53), Expect = 0.31
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 6 THVFVVQYFIPILMIILCYKR 68
T +F+ Y IP++ IIL Y R
Sbjct: 222 TCIFIWAYVIPLIFIILFYSR 242
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 25.4 bits (53), Expect = 0.31
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 6 THVFVVQYFIPILMIILCYKR 68
T +F+ Y IP++ IIL Y R
Sbjct: 222 TCIFIWAYVIPLIFIILFYSR 242
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 0.71
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 384 CFFRKPEQFIA 352
C FRKPE F+A
Sbjct: 1615 CLFRKPEHFVA 1625
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 366 EQFIAILNSFSPKRYFMRCRVL 301
EQ +A+ N F RY C L
Sbjct: 18 EQLVALENKFKTTRYLSVCERL 39
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 77 IIAYKQYNGDDNKDDFNSVPRMYRLLSLAVILVAV 181
II+ YN + +++NS Y ++++ I V V
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNIINIEQIPVPV 337
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 77 IIAYKQYNGDDNKDDFNSVPRMYRLLSLAVILVAV 181
II+ YN + +++NS Y ++++ I V V
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNIINIEQIPVPV 348
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 YKQYNGDDNKDDFNSVPRMYRL 151
+KQ +DNK D S + RL
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERL 36
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 419 SSPPDSWTSHRNVSSGNR 366
+SPP + TS ++VSS R
Sbjct: 1752 ASPPPAATSMKSVSSRRR 1769
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 419 SSPPDSWTSHRNVSSGNR 366
+SPP + TS ++VSS R
Sbjct: 1748 ASPPPAATSMKSVSSRRR 1765
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,779
Number of Sequences: 438
Number of extensions: 2695
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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