Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J02
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96145-1|AAA28057.1|  562|Caenorhabditis elegans elastase protein.     30   0.62 
AF016680-3|AAB66165.2|  562|Caenorhabditis elegans Abnormal gut ...    30   0.62 
AL110490-9|CAB54453.2|  607|Caenorhabditis elegans Hypothetical ...    29   0.82 
AF039650-1|AAC14022.3|  607|Caenorhabditis elegans acetylcholine...    29   0.82 
Z75955-2|CAB00112.1|  355|Caenorhabditis elegans Hypothetical pr...    29   1.1  
U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA...    27   4.4  
U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA...    27   4.4  
Z81496-8|CAB04068.1|  498|Caenorhabditis elegans Hypothetical pr...    26   7.6  

>M96145-1|AAA28057.1|  562|Caenorhabditis elegans elastase protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 2   FNRGIAFSGSAFTSWSHSVKPAQKAKTLASIVGC 103
           +++ I  S S+F  W+      + +K LA I+GC
Sbjct: 217 YSKAIIMSASSFVGWATGPNVVETSKQLAEILGC 250


>AF016680-3|AAB66165.2|  562|Caenorhabditis elegans Abnormal gut
           esterase protein 1 protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 2   FNRGIAFSGSAFTSWSHSVKPAQKAKTLASIVGC 103
           +++ I  S S+F  W+      + +K LA I+GC
Sbjct: 217 YSKAIIMSASSFVGWATGPNVVETSKQLAEILGC 250


>AL110490-9|CAB54453.2|  607|Caenorhabditis elegans Hypothetical
           protein Y48B6A.8 protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 0.82
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 2   FNRGIAFSGSAFTSWS-HSVKPA-QKAKTLASIVGCS 106
           F  GI  SGS    WS  S K A QK+  LA +VGC+
Sbjct: 243 FQNGILQSGSLDNKWSMDSPKRAKQKSTALADLVGCN 279


>AF039650-1|AAC14022.3|  607|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 0.82
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 2   FNRGIAFSGSAFTSWS-HSVKPA-QKAKTLASIVGCS 106
           F  GI  SGS    WS  S K A QK+  LA +VGC+
Sbjct: 243 FQNGILQSGSLDNKWSMDSPKRAKQKSTALADLVGCN 279


>Z75955-2|CAB00112.1|  355|Caenorhabditis elegans Hypothetical
           protein R07B7.3 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 174 QTEMLIGRCLITPFVQQRGARSPERLPYQVP 266
           Q E ++ R + TP  QQR  R P+R   Q P
Sbjct: 257 QYEQVVQRVIQTPVAQQRFQRQPQRFQQQQP 287


>U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform b protein.
          Length = 583

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 45  GVTPSNRRRRRKHSPL*SAVPXNNSKEILECLKYRPAEVIVNAQT 179
           GV+ S  R + + S     +  NN +E LEC  +  AE +++  T
Sbjct: 375 GVSKSETRPKMRRSDELKILGYNNEREELECEWFNEAEQLISRLT 419


>U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform a protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 45  GVTPSNRRRRRKHSPL*SAVPXNNSKEILECLKYRPAEVIVNAQT 179
           GV+ S  R + + S     +  NN +E LEC  +  AE +++  T
Sbjct: 388 GVSKSETRPKMRRSDELKILGYNNEREELECEWFNEAEQLISRLT 432


>Z81496-8|CAB04068.1|  498|Caenorhabditis elegans Hypothetical
           protein F09C6.8 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 351 FDRLQLDKTSCAVTKYEWTLTFSGNGLVRVLGKEGV 244
           F RL++D+  CA  K    LT S +      G+EGV
Sbjct: 284 FRRLEIDEVECAALKVILLLTPSCSKRAIYAGREGV 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,704,057
Number of Sequences: 27780
Number of extensions: 170664
Number of successful extensions: 486
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)