Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I24
         (301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   0.82 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    22   5.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    21   7.6  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 10  SLLPSIQSIQLNDDHC 57
           S +P+++ +QLN DHC
Sbjct: 62  SAMPALKILQLNVDHC 77


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 198 QYLRCCLRYTP 230
           Q L CC+R+TP
Sbjct: 589 QQLCCCIRHTP 599


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1154

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 16 LPSIQSIQLNDDHC 57
          + S++ +QLN DHC
Sbjct: 1  MSSLRVLQLNVDHC 14


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,432
Number of Sequences: 2352
Number of extensions: 6690
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)