Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I24
         (301 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142991-1|AAI42992.1|  230|Homo sapiens C9orf103 protein protein.     29   2.7  
AY615889-1|AAT27441.1|  187|Homo sapiens glucokinase-like protei...    29   2.7  
AL354920-2|CAI15098.1|  187|Homo sapiens chromosome 9 open readi...    29   2.7  

>BC142991-1|AAI42992.1|  230|Homo sapiens C9orf103 protein protein.
          Length = 230

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +3

Query: 9   KFTSIHTIHSTERRPLLEIGLP---KDRRPFLCNLH 107
           KF      H  E R  +  G+P   +DR P+LCNLH
Sbjct: 74  KFYDADDYHPEENRRKMGKGIPLNDQDRIPWLCNLH 109


>AY615889-1|AAT27441.1|  187|Homo sapiens glucokinase-like protein
           protein.
          Length = 187

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +3

Query: 9   KFTSIHTIHSTERRPLLEIGLP---KDRRPFLCNLH 107
           KF      H  E R  +  G+P   +DR P+LCNLH
Sbjct: 31  KFYDADDYHPEENRRKMGKGIPLNDQDRIPWLCNLH 66


>AL354920-2|CAI15098.1|  187|Homo sapiens chromosome 9 open reading
           frame 103 protein.
          Length = 187

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +3

Query: 9   KFTSIHTIHSTERRPLLEIGLP---KDRRPFLCNLH 107
           KF      H  E R  +  G+P   +DR P+LCNLH
Sbjct: 31  KFYDADDYHPEENRRKMGKGIPLNDQDRIPWLCNLH 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,271,482
Number of Sequences: 237096
Number of extensions: 1061141
Number of successful extensions: 1768
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)