Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I24
         (301 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical p...    26   4.4  
Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical pr...    26   4.4  
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ...    25   7.6  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    25   7.6  

>Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E3.5f protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 185 ETLLPIVKSLEADDNECW 202


>Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical
           protein K08E3.5e protein.
          Length = 496

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 188 ETLLPIVKSLEADDNECW 205


>Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical
           protein K08E3.5d protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 189 ETLLPIVKSLEADDNECW 206


>Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical
           protein K08E3.5c protein.
          Length = 511

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 203 ETLLPIVKSLEADDNECW 220


>Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical
           protein K08E3.5b protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 214 ETLLPIVKSLEADDNECW 231


>Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical
           protein K08E3.5a protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 7   QSLLPSIQSIQLNDDHCW 60
           ++LLP ++S++ +D+ CW
Sbjct: 201 ETLLPIVKSLEADDNECW 218


>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3b protein.
          Length = 1271

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 42   ERR-PLLEIGLPKDRRPFLCNL 104
            ERR P +E+G+PK +  F C L
Sbjct: 943  ERRYPGMELGIPKQQADFYCQL 964


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 42   ERR-PLLEIGLPKDRRPFLCNL 104
            ERR P +E+G+PK +  F C L
Sbjct: 943  ERRYPGMELGIPKQQADFYCQL 964


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,764,900
Number of Sequences: 27780
Number of extensions: 155098
Number of successful extensions: 294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)