Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_I23
(258 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 27 2.4
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 27 2.4
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 2.4
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 27 2.4
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 26 3.2
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 26 3.2
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 26 3.2
AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical ... 26 4.2
AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical ... 25 5.6
Z49153-1|CAA89022.1| 293|Caenorhabditis elegans Hypothetical pr... 25 7.4
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 25 7.4
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 25 7.4
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 25 7.4
AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 25 7.4
AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 25 7.4
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 25 7.4
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 25 7.4
AF016420-4|AAB65308.1| 703|Caenorhabditis elegans Na/ca exchang... 25 7.4
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 25 7.4
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 25 9.8
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 25 9.8
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 25 9.8
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 25 9.8
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 25 9.8
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 25 9.8
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 25 9.8
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 25 9.8
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 25 9.8
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PSRNNQHHHEAPFPACIVQGTAPPGLH-FVPHSLCSALFSP 126
P N QHH + FP+ PP H P+S+ S SP
Sbjct: 60 PPANMQHHFQPSFPSVGRAPPVPPPPHPSHPYSISSQQSSP 100
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PSRNNQHHHEAPFPACIVQGTAPPGLH-FVPHSLCSALFSP 126
P N QHH + FP+ PP H P+S+ S SP
Sbjct: 60 PPANMQHHFQPSFPSVGRAPPVPPPPHPSHPYSISSQQSSP 100
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 26.6 bits (56), Expect = 2.4
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 87 VETRRGGALHNTSGKWSFMMVLIVSRWRQ 1
+E+ +N +W +++ L+ +WRQ
Sbjct: 63 IESSEAKTFNNVLSRWEYLLKLLALKWRQ 91
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PSRNNQHHHEAPFPACIVQGTAPPGLH-FVPHSLCSALFSP 126
P N QHH + FP+ PP H P+S+ S SP
Sbjct: 105 PPANMQHHFQPSFPSVGRAPPVPPPPHPSHPYSISSQQSSP 145
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 4 SPSRNNQHHHEAPFPACIV--QGTAPPGLHFVP 96
+P +N H + P PA + QG PG+ VP
Sbjct: 187 TPVQNEYHPQQQPHPAMMAPQQGPPAPGMGMVP 219
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 4 SPSRNNQHHHEAPFPACIV--QGTAPPGLHFVP 96
+P +N H + P PA + QG PG+ VP
Sbjct: 512 TPVQNEYHPQQQPHPAMMAPQQGPPAPGMGMVP 544
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 4 SPSRNNQHHHEAPFPACIVQGTAPPG--LHFVPHSLCS 111
+PS++N+ H A PA I +AP +H P SL S
Sbjct: 1374 TPSQSNRAQHPASSPAPIAPTSAPTDDFVHVPPTSLTS 1411
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 4 SPSRNNQHHHEAPFPACIV--QGTAPPGLHFVP 96
+P +N H + P PA + QG PG+ VP
Sbjct: 512 TPVQNEYHPQQQPHPAMMAPQQGPPAPGMGMVP 544
>AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical
protein Y47H10A.3 protein.
Length = 333
Score = 25.8 bits (54), Expect = 4.2
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -1
Query: 180 NKIHYMIKMFFKGIKQFHWRE 118
N+ HY +K+F G+ ++ W++
Sbjct: 180 NRQHYELKVFSGGLNEYFWKK 200
>AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical
protein C39B5.6 protein.
Length = 397
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 109 SIMNEVRSGDQEGRCLAQYKREMELHD 29
++ NE R+ D EGR ++ +E E D
Sbjct: 158 AVQNETRAADSEGRTVSMRDKETEETD 184
>Z49153-1|CAA89022.1| 293|Caenorhabditis elegans Hypothetical
protein C32A9.1 protein.
Length = 293
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 220 SYGSKFNSKHIYFQQNTLHDKNVF 149
+Y ++ +IYF+Q+ HDK +F
Sbjct: 227 TYITRCEMTYIYFRQSAKHDKLIF 250
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 154 PACAICGTDSTGIHFGVDACAACSAFF 180
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 158 PACAICGTDSTGIHFGVDACAACSAFF 184
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 153 PACAICGTDSTGIHFGVDACAACSAFF 179
>AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform b protein.
Length = 526
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 60 PACAICGTDSTGIHFGVDACAACSAFF 86
>AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform a protein.
Length = 577
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 111 PACAICGTDSTGIHFGVDACAACSAFF 137
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 193 PACAICGTDSTGIHFGVDACAACSAFF 219
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 46 PACIVQGTAPPGLHFVPH--SLCSALF 120
PAC + GT G+HF + CSA F
Sbjct: 267 PACAICGTDSTGIHFGVDACAACSAFF 293
>AF016420-4|AAB65308.1| 703|Caenorhabditis elegans Na/ca exchangers
protein 8 protein.
Length = 703
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 145 RNKTISLERIKRSIMNEVRSGDQEGR 68
RNKT+ + ++E+ S D EGR
Sbjct: 366 RNKTLDTDLESMKTLDEMESSDDEGR 391
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 106 CSALFSPVKLFYSFKKHFYHVMYFVENKYASN*ISN 213
C+ +FS V+ F FK +F Y K+A ++N
Sbjct: 19 CTCIFSKVEKFRRFKTYFPSHHYTPTGKFADISLTN 54
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 54 YCARHRPSWSPLRTSFIML 110
Y A HRP WS SF+ L
Sbjct: 564 YAALHRPMWSFALLSFVYL 582
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 54 YCARHRPSWSPLRTSFIML 110
Y A HRP WS SF+ L
Sbjct: 564 YAALHRPMWSFALLSFVYL 582
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 216 MVRNLIRSIFIFNKIHYMIKMFFKGIKQFHW 124
M+ IF+F Y + F + FHW
Sbjct: 267 MINMFNEKIFLFLWFWYFMVAFVSAVSMFHW 297
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 67 TAPPGLHFVPHSLCSALFSPVKLFYSFKKHFYHVMYFVENKYASN*ISN 213
T P LHF + L SP K+ ++ ++Y ++ S+ ++N
Sbjct: 256 TIPTPLHFSTYMLVYLSASPAKIHLTYYLLELSILYVHNRRFPSDVVAN 304
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 216 MVRNLIRSIFIFNKIHYMIKMFFKGIKQFHW 124
M+ IF+F Y + F + FHW
Sbjct: 267 MINMFNEKIFLFLWFWYFMVAFVSAVSMFHW 297
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 216 MVRNLIRSIFIFNKIHYMIKMFFKGIKQFHW 124
M+ IF+F Y + F + FHW
Sbjct: 267 MINMFNEKIFLFLWFWYFMVAFVSAVSMFHW 297
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 1 LSPSRNNQHHHEAPFPACIVQGTAPP 78
L+PSR+N FP TAPP
Sbjct: 1350 LTPSRDNSSPSAFQFPVVYEASTAPP 1375
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 54 YCARHRPSWSPLRTSFIML 110
Y A HRP WS SF+ L
Sbjct: 564 YAALHRPMWSFALLSFVYL 582
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 63 RHRPSWSPLRTSFIML 110
R+R SW+ LRTSF +L
Sbjct: 1211 RNRVSWTELRTSFHLL 1226
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 1 LSPSRNNQHHHEAPFPACIVQGTAPP 78
L+PSR+N FP TAPP
Sbjct: 1350 LTPSRDNSSPSAFQFPVVYEASTAPP 1375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,584,445
Number of Sequences: 27780
Number of extensions: 103924
Number of successful extensions: 328
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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