Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I23
         (258 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   0.80 
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    21   1.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   4.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    19   7.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    19   7.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    19   7.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   9.8  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    19   9.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 0.80
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 93  YEVETRRGGALHNTSGKWSFMMVLIVSR 10
           Y+   +R GAL      W+F M+ + SR
Sbjct: 83  YKDLNQRYGALCKEEALWNFPMISVFSR 110


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 187 YFQQNTLHDKNVF*RNK 137
           YFQQ  LH K +  +NK
Sbjct: 17  YFQQYCLHHKILIKKNK 33


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 64  LAQYKREMELHDGV 23
           L +Y+   E+HDG+
Sbjct: 332 LTEYQAVKEMHDGI 345


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +1

Query: 16  NNQHHHEAPFPACIVQGTAPP 78
           N  H  + P P  +  G  PP
Sbjct: 105 NINHIEQIPVPVPVYYGNFPP 125


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 220 SYGSKFNSKHIYF 182
           +Y + +NSK +Y+
Sbjct: 313 NYNNNYNSKKLYY 325


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 220 SYGSKFNSKHIYF 182
           +Y + +NSK +Y+
Sbjct: 324 NYNNNYNSKKLYY 336


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 90  EVETRRGGALHNTSGKWSFM 31
           E ETR+G  LH  S +  F+
Sbjct: 122 ENETRQGLTLHYRSKRRGFV 141


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 96  SFIMLRFILSSEIVLFL*KTF 158
           S I++ FILS  I + + +TF
Sbjct: 4   SQILILFILSLTITIVMCQTF 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,986
Number of Sequences: 438
Number of extensions: 1266
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)