BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_I22
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 3.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 3.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.8
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.3
AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding prote... 21 6.3
AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-bind... 21 6.3
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 6.3
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 172 VSVKVPPFWPDEPT 213
+ VKVPP W EPT
Sbjct: 704 LQVKVPPRWIVEPT 717
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 193 FWP-DEPTLWFAQLEGQFALANITSDMTKYN 282
FW D+PT++ +L + N+ ++ YN
Sbjct: 42 FWHVDQPTVYHPELYQKARTFNLVENLDNYN 72
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 193 FWP-DEPTLWFAQLEGQFALANITSDMTKYN 282
FW D+PT++ +L + N+ ++ YN
Sbjct: 42 FWHVDQPTVYHPELYQKARTFNLVENLDNYN 72
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 229 LEGQFALANITSDMTKYNYVLA 294
+EGQF + I D YN + A
Sbjct: 33 MEGQFLVRQIYDDEITYNIISA 54
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 4.8
Identities = 7/30 (23%), Positives = 20/30 (66%)
Frame = +1
Query: 334 IKNPPNSGKYDKLKNELVTRLSSSQEQRVR 423
IK P+S + +++ + + R+ ++Q+Q ++
Sbjct: 1049 IKQSPSSNQSQQIQQQQLKRVVTNQQQSIQ 1078
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 229 LEGQFALANITSDMTKYNYVLA 294
+EGQF + I D YN + A
Sbjct: 33 MEGQFLVRQIYDDEITYNIISA 54
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 169 SVSVKVPPFWPDEPT 213
+++V VPP W EPT
Sbjct: 672 TLTVNVPPRWILEPT 686
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 426 LTYPLLLRRRESCYEF--VLQLVIFSRVR-RVFY 334
+TY + LRRR Y F +L ++ + V VFY
Sbjct: 203 ITYEIRLRRRPMFYVFNLILPCILINSVALLVFY 236
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 458 LRSPIS-SCVSN*RTLCSCDDES 393
L S IS S SN +TLC CD ++
Sbjct: 655 LCSEISESYSSNNKTLCKCDAQN 677
>AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding protein
ASP2 protein.
Length = 142
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = +2
Query: 446 SAIANRLSFYDTCRALLVPVYQMTSCDHYGQAD 544
+ + R+ + PVY+M H G AD
Sbjct: 71 ACVMKRIEMLKGTELYVEPVYKMIEVVHAGNAD 103
>AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-binding
protein ASP2 protein.
Length = 142
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = +2
Query: 446 SAIANRLSFYDTCRALLVPVYQMTSCDHYGQAD 544
+ + R+ + PVY+M H G AD
Sbjct: 71 ACVMKRIEMLKGTELYVEPVYKMIEVVHAGNAD 103
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 178 VKVPPFWPDEPTLWFAQLE 234
V PPFW ++ +AQ++
Sbjct: 107 VGYPPFWDEDQHRLYAQIK 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,744
Number of Sequences: 438
Number of extensions: 2830
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -