Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I21
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    49   3e-08
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   4.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.3  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 49.2 bits (112), Expect = 3e-08
 Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +2

Query: 104 SSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL-DCEELIKAF 259
           S  + + VE++L K+ +KG   YL+KWK +    +TWEP+ NL +C ++++ F
Sbjct: 239 SETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEF 291


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 455 KAEKIIGASDATGELMSLVTWIDSDEAELVP 547
           K  K+IG +    ++ +LV  + S   +LVP
Sbjct: 30  KGMKVIGIAPQVDKMKTLVEELKSKPGKLVP 60


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 162 FPFTVRLSRTFSTTNSSSLDPSLVSVFLSFLPIS 61
           FPF     +  S  ++SS    LV  +++++P S
Sbjct: 304 FPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPS 337


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 262 RHQERERKNKKTRRSWQK 315
           R +ERE+ + K  R +QK
Sbjct: 41  RSREREQNSYKNEREYQK 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,041
Number of Sequences: 438
Number of extensions: 2469
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)