Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I20
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   2.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   2.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   7.1  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   7.1  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    20   9.4  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 49  ALCVGVQSRYLIVSEPVYYIQHYEEP 126
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 501 AICVGVFTFNIIKFVPVKYLT-YEYP 525


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 49  ALCVGVQSRYLIVSEPVYYIQHYEEP 126
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 554 AICVGVFTFNIIKFVPVKYLT-YEYP 578


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYY 105
           +++LC     RYL V++P+ Y
Sbjct: 126 ILSLCAISIDRYLAVTQPLIY 146


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYYIQH 114
           LVA+ +    RY+ V++P+ Y +H
Sbjct: 277 LVAISI---DRYIAVTQPIKYAKH 297


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYYIQ 111
           ++ LC     RYL V+ PV Y Q
Sbjct: 153 ILNLCAISLDRYLAVTRPVSYPQ 175


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYYIQ 111
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYYIQ 111
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 43  LVALCVGVQSRYLIVSEPVYYIQ 111
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 286 LGAATAGVALDNVNGHGVSLTDTHIPGFGDKVD 384
           +G   AGV   N NG  V   D      GD  D
Sbjct: 369 VGRNGAGVGAMNANGEAVGEVDEDDDDDGDDDD 401


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 106 IQHYEEPELLTSSRV 150
           +Q +EE ++LTSS V
Sbjct: 47  VQGFEEQDILTSSGV 61


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 391 GSCQPCLRTRGCVYP*D 341
           GSC     T+ CV P D
Sbjct: 99  GSCNNYWNTKNCVNPYD 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,541
Number of Sequences: 438
Number of extensions: 2131
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)