Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_I16
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 171 3e-43
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 171 3e-43
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z49966-7|CAD57696.1| 125|Caenorhabditis elegans Hypothetical pr... 31 0.52
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 30 0.91
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 30 0.91
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 30 0.91
CU457740-8|CAM36338.1| 362|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81463-8|CAB03849.2| 346|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z81044-1|CAB02810.1| 223|Caenorhabditis elegans Hypothetical pr... 27 6.4
U97593-4|AAB52877.2| 93|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 27 6.4
Z95559-17|CAL44975.1| 331|Caenorhabditis elegans Hypothetical p... 27 8.4
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 27 8.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 8.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 8.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 8.4
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 171 bits (415), Expect = 3e-43
Identities = 82/148 (55%), Positives = 106/148 (71%)
Frame = +2
Query: 2 FKLHARERKFVVREFSYNEADLVAGKNEITKLVTDKKKQFGPLVRWLKVNFSECFCAWIH 181
FK ARE KF+VR+F Y+E L AG+ E KL+ +K++Q+ PL+RWLK+NF E F A+IH
Sbjct: 239 FKNTARENKFIVRDFVYDEETLKAGRTERDKLMAEKQRQYAPLIRWLKINFGEIFAAYIH 298
Query: 182 VKALRVFVESVLRYGLPVNFQAVVMVPSRKSMKKLRDVLQQLYAHLDHSAQHHGSSAQDT 361
+KALRVFVESVLRYGLPVNFQA V+ P++ KKLR L +LY HLD SA + +D+
Sbjct: 299 IKALRVFVESVLRYGLPVNFQAAVIEPAKGQQKKLRQELHKLYIHLDGSAAGPIDTLEDS 358
Query: 362 VELAGLGFGQSEYIPYVSYKINIDMIEK 445
L LG +EY PYV +K+NID + K
Sbjct: 359 PALMSLGV--NEYYPYVFFKLNIDFLNK 384
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 171 bits (415), Expect = 3e-43
Identities = 82/148 (55%), Positives = 106/148 (71%)
Frame = +2
Query: 2 FKLHARERKFVVREFSYNEADLVAGKNEITKLVTDKKKQFGPLVRWLKVNFSECFCAWIH 181
FK ARE KF+VR+F Y+E L AG+ E KL+ +K++Q+ PL+RWLK+NF E F A+IH
Sbjct: 239 FKNTARENKFIVRDFVYDEETLKAGRTERDKLMAEKQRQYAPLIRWLKINFGEIFAAYIH 298
Query: 182 VKALRVFVESVLRYGLPVNFQAVVMVPSRKSMKKLRDVLQQLYAHLDHSAQHHGSSAQDT 361
+KALRVFVESVLRYGLPVNFQA V+ P++ KKLR L +LY HLD SA + +D+
Sbjct: 299 IKALRVFVESVLRYGLPVNFQAAVIEPAKGQQKKLRQELHKLYIHLDGSAAGPIDTLEDS 358
Query: 362 VELAGLGFGQSEYIPYVSYKINIDMIEK 445
L LG +EY PYV +K+NID + K
Sbjct: 359 PALMSLGV--NEYYPYVFFKLNIDFLNK 384
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -1
Query: 231 GRPYLSTDSTNTRKALTWI--QAQKHSEKLTFNH 136
G PYLSTD TN +++++ QAQK ++ NH
Sbjct: 36 GNPYLSTDKTNLDISVSFLTSQAQKKMRGMSANH 69
>Z49966-7|CAD57696.1| 125|Caenorhabditis elegans Hypothetical
protein F35C11.7 protein.
Length = 125
Score = 30.7 bits (66), Expect = 0.52
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -1
Query: 402 IYSDCPKPSPANSTVSWALEPWCWAEWSRWAYSCWSTS---RSFFMLLRDGTITTAWKFT 232
I ++ P+ S + ST +W + W++WS + C S R+ L D T T + T
Sbjct: 30 IPTNAPQSSTSCSTATWLV----WSDWSTCSDECGSCGVQMRTRTCLTTDSTCTCSGSST 85
Query: 231 GRPYLSTD 208
G Y + D
Sbjct: 86 GVQYCNLD 93
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 212 VLRYGLPVNFQAVVMVPSRKSMKKL-RDVLQQLYAHLDHSAQHHGSSAQDTVELAGLGF 385
V R+GLP+ +V + + KKL DV+ Q++ ++HS S A D E G+
Sbjct: 893 VSRFGLPL----IVGLDEEVTGKKLYEDVMYQMHRFMEHSVNSSSSRAHDPCEDENSGY 947
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 212 VLRYGLPVNFQAVVMVPSRKSMKKL-RDVLQQLYAHLDHSAQHHGSSAQDTVELAGLGF 385
V R+GLP+ +V + + KKL DV+ Q++ ++HS S A D E G+
Sbjct: 896 VSRFGLPL----IVGLDEEVTGKKLYEDVMYQMHRFMEHSVNSSSSRAHDPCEDENSGY 950
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 212 VLRYGLPVNFQAVVMVPSRKSMKKL-RDVLQQLYAHLDHSAQHHGSSAQDTVELAGLGF 385
V R+GLP+ +V + + KKL DV+ Q++ ++HS S A D E G+
Sbjct: 893 VSRFGLPL----IVGLDEEVTGKKLYEDVMYQMHRFMEHSVNSSSSRAHDPCEDENSGY 947
>CU457740-8|CAM36338.1| 362|Caenorhabditis elegans Hypothetical
protein C50E10.8 protein.
Length = 362
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +2
Query: 161 CFCAWIHVKALRVFV----ESVLRYGLPVNFQA 247
C W ++K LR F ES Y LPV FQA
Sbjct: 212 CINRWYNLKVLREFEQRPRESAKHYTLPVRFQA 244
>Z81463-8|CAB03849.2| 346|Caenorhabditis elegans Hypothetical
protein C06B8.6 protein.
Length = 346
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 152 FSECFCAWIHVKALRVFVESVLRYGLPVNFQAVVMVPSRKS 274
FS F ++H +E ++ G + F + + P RKS
Sbjct: 295 FSSLFMLFVHASYREAVLECFVKIGRILGFNIITVYPERKS 335
>Z81044-1|CAB02810.1| 223|Caenorhabditis elegans Hypothetical
protein C30H6.1 protein.
Length = 223
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -1
Query: 330 AEWSRWAYSCWSTSRSFFMLLRDGTITTAWKFT-GRP 223
AEW + Y W + ++ LR TAW +T G P
Sbjct: 148 AEWLNYQYKLWWSKMDDWIGLRRNCDNTAWAWTDGTP 184
>U97593-4|AAB52877.2| 93|Caenorhabditis elegans Hypothetical
protein C46G7.1 protein.
Length = 93
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 441 SIMSMLILYDTYGIYSDCPKPSPANSTVSWALEPWCWAE-WSRWAYSCW 298
+I+ L + G++ D PK S A WA + + + + AY+CW
Sbjct: 22 AILGGLFYNQSVGLFEDLPKESKAMEKSLWADRTTNFNKLYQQNAYNCW 70
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 224 GLPVNFQAVVMVPSRKSMKKLRDVLQQLYAHLDH 325
GLP+ FQ + S S K+ L+ Y H+ +
Sbjct: 37 GLPIFFQMCIFTASYSSPSKIAQFLKDSYPHMKY 70
>Z95559-17|CAL44975.1| 331|Caenorhabditis elegans Hypothetical
protein Y41E3.19 protein.
Length = 331
Score = 26.6 bits (56), Expect = 8.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 182 VKALRVFVESVLRYGLPVNFQAVVMVPSRKSMKKLRDVL 298
++ + V VES+ YG+ + + M PS K M +R +L
Sbjct: 222 IRTMLVVVESIEEYGMCHTYVELNMNPSLKLMDAIRKLL 260
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 159 SEKLTFNHRTNGPNCFFLSVTSFVISF-FPATRSASLYE 46
SEKLT H T G C F S+T F+ +++AS Y+
Sbjct: 860 SEKLTSAHSTAGIACVFGSLTLFLAGCPLLFSQTASFYQ 898
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 222 YLSTDSTNTRKALTWIQAQKHSEKLTF 142
+L D+TN + L +Q Q+H+E + F
Sbjct: 158 HLRVDATNLSRQLQQLQQQQHTESMRF 184
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 222 YLSTDSTNTRKALTWIQAQKHSEKLTF 142
+L D+TN + L +Q Q+H+E + F
Sbjct: 158 HLRVDATNLSRQLQQLQQQQHTESMRF 184
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 222 YLSTDSTNTRKALTWIQAQKHSEKLTF 142
+L D+TN + L +Q Q+H+E + F
Sbjct: 158 HLRVDATNLSRQLQQLQQQQHTESMRF 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,840,847
Number of Sequences: 27780
Number of extensions: 167834
Number of successful extensions: 587
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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