Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_I13
(406 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 33 0.48
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 0.48
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 33 0.48
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein. 31 1.5
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein. 31 1.5
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein. 31 1.5
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 30 3.4
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 30 3.4
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 30 3.4
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 30 3.4
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 30 3.4
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 30 3.4
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 30 3.4
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 30 3.4
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 30 3.4
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 30 3.4
M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein. 29 4.5
M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein. 29 4.5
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 29 5.9
CR542077-1|CAG46874.1| 326|Homo sapiens PEX10 protein. 29 5.9
BC018198-1|AAH18198.1| 326|Homo sapiens peroxisome biogenesis f... 29 5.9
BC000543-1|AAH00543.1| 346|Homo sapiens peroxisome biogenesis f... 29 5.9
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 29 5.9
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 29 5.9
AL513477-1|CAI22603.1| 346|Homo sapiens peroxisome biogenesis f... 29 5.9
AF060502-1|AAC18133.1| 326|Homo sapiens peroxisome assembly pro... 29 5.9
AB013818-1|BAA87895.1| 326|Homo sapiens peroxisome biogenesis f... 29 5.9
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 29 7.8
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 29 7.8
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 29 7.8
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.48
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + S+ SG+ GYSG Q+S N GH+ D
Sbjct: 266 HGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSED 313
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 32.7 bits (71), Expect = 0.48
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + S+ SG+ GYSG Q+S N GH+ D
Sbjct: 2654 HGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSED 2701
Score = 32.7 bits (71), Expect = 0.48
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + S+ SG+ GYSG Q+S N GH+ D
Sbjct: 2978 HGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSED 3025
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.48
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + S+ SG+ GYSG Q+S N GH+ D
Sbjct: 170 HGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSED 217
Score = 32.7 bits (71), Expect = 0.48
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + S+ SG+ GYSG Q+S N GH+ D
Sbjct: 494 HGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSED 541
>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTY 402
HA Y+ + + T S S Y S GYSG S T+SGHT+
Sbjct: 1705 HAHYHHGLTTQTGSRTTGRRGSGHSEY-SDSEGYSGVSHTHSGHTH 1749
Score = 28.7 bits (61), Expect = 7.8
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 103 LGEGRKTRTGSVFTAANSK---GVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAG 273
LG G+ T G + + G +GSG+ S G++ +G
Sbjct: 572 LGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF-GQHESRSGQSSYGQHSSGSSQSSG 630
Query: 274 YNTQSSALSNG-GTYSASDSQSSRYHSGYNGYSGQSSTNSGH 396
Y S ++G G + + SQS+ + Y SGQSS H
Sbjct: 631 YGQHGSRQTSGFGQHGSGSSQSTGFGQ-YGSGSGQSSGFGQH 671
>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
Length = 2391
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTY 402
HA Y+ + + T S S Y S GYSG S T+SGHT+
Sbjct: 1705 HAHYHHGLTTQTGSRTTGRRGSGHSEY-SDSEGYSGVSHTHSGHTH 1749
Score = 28.7 bits (61), Expect = 7.8
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 103 LGEGRKTRTGSVFTAANSK---GVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAG 273
LG G+ T G + + G +GSG+ S G++ +G
Sbjct: 572 LGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF-GQHESRSGQSSYGQHSSGSSQSSG 630
Query: 274 YNTQSSALSNG-GTYSASDSQSSRYHSGYNGYSGQSSTNSGH 396
Y S ++G G + + SQS+ + Y SGQSS H
Sbjct: 631 YGQHGSRQTSGFGQHGSGSSQSTGFGQ-YGSGSGQSSGFGQH 671
>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTY 402
HA Y+ + + T S S Y S GYSG S T+SGHT+
Sbjct: 1705 HAHYHHGLTTQTGSRTTGRRGSGHSEY-SDSEGYSGVSHTHSGHTH 1749
Score = 28.7 bits (61), Expect = 7.8
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 103 LGEGRKTRTGSVFTAANSK---GVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAG 273
LG G+ T G + + G +GSG+ S G++ +G
Sbjct: 572 LGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF-GQHESRSGQSSYGQHSSGSSQSSG 630
Query: 274 YNTQSSALSNG-GTYSASDSQSSRYHSGYNGYSGQSSTNSGH 396
Y S ++G G + + SQS+ + Y SGQSS H
Sbjct: 631 YGQHGSRQTSGFGQHGSGSSQSTGFGQ-YGSGSGQSSGFGQH 671
>X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion
protein.
Length = 462
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 62 NTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGPQPTPSS 107
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein.
Length = 462
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGT--YSASDSQSSRY--HSGYNGYSGQSSTNS 390
+ GY TQS+ G T Y +S S S Y S Y GY Q + +S
Sbjct: 63 NTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSS 108
>M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein.
Length = 1218
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + ++ SG+ GY G Q+S N GH+ D
Sbjct: 384 HGSHHQQSADSSRHSGIGHGQASTAVSDSGHRGYRGSQASDNEGHSED 431
>M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein.
Length = 990
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSG-QSSTNSGHTYD 405
H ++ QS+ S + ++ SG+ GY G Q+S N GH+ D
Sbjct: 162 HGSHHQQSADSSRHSGIGHGQASTAVSDSGHRGYRGSQASDNEGHSED 209
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 265 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNS-GHTYD 405
H ++ QS+ S + S+ SG+ GY G +T+S GH+ D
Sbjct: 38 HGSHHQQSADSSRHAGIGHGQASSAVRDSGHRGYRGSQATDSEGHSED 85
>CR542077-1|CAG46874.1| 326|Homo sapiens PEX10 protein.
Length = 326
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 286 TPCGHLFCWECITAWCSSKAECPLCREKFPP 316
>BC018198-1|AAH18198.1| 326|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 326
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 286 TPCGHLFCWECITAWCSSKAECPLCREKFPP 316
>BC000543-1|AAH00543.1| 346|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 306 TPCGHLFCWECITAWCSSKAECPLCREKFPP 336
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor
protein.
Length = 2850
Score = 29.1 bits (62), Expect = 5.9
Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Frame = +1
Query: 58 AQHQMGGLVKQVQ*ELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGRNFQEGVXXXX 237
+Q Q G Q G +R S + S + SG S+ G++ G
Sbjct: 373 SQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSG 432
Query: 238 XXXXXXXXXHA---GYNTQSSALSNGGTYSAS---DSQSSRYHSGYNGYSGQSSTNSGH 396
H G ++ S +G YS+ SS + SGY + S +SGH
Sbjct: 433 SGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGH 491
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 29.1 bits (62), Expect = 5.9
Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Frame = +1
Query: 58 AQHQMGGLVKQVQ*ELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGRNFQEGVXXXX 237
+Q Q G Q G +R S + S + SG S+ G++ G
Sbjct: 373 SQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSG 432
Query: 238 XXXXXXXXXHA---GYNTQSSALSNGGTYSAS---DSQSSRYHSGYNGYSGQSSTNSGH 396
H G ++ S +G YS+ SS + SGY + S +SGH
Sbjct: 433 SGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGH 491
>AL513477-1|CAI22603.1| 346|Homo sapiens peroxisome biogenesis
factor 10 protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 306 TPCGHLFCWECITAWCSSKAECPLCREKFPP 336
>AF060502-1|AAC18133.1| 326|Homo sapiens peroxisome assembly
protein PEX10 protein.
Length = 326
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 286 TPCGHLFCWECITAWCSSKAECPLCREKFPP 316
>AB013818-1|BAA87895.1| 326|Homo sapiens peroxisome biogenesis
factor (peroxin) 10 protein.
Length = 326
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 110 SPSSHCTCFTNPPIWCCAKPSILCARSKFPP 18
+P H C+ WC +K R KFPP
Sbjct: 286 TPCGHLFCWECITAWCSSKAECPLCREKFPP 316
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 172 SGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYN--TQSSALSNGGTYSASDSQSSRY 345
SG+Y S E +++ ++GY T SS N YS+ S Y
Sbjct: 4 SGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSGY 63
Query: 346 HSGYNGYSGQSSTN 387
Y GY Q ++
Sbjct: 64 SQSYGGYENQKQSS 77
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 172 SGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYN--TQSSALSNGGTYSASDSQSSRY 345
SG+Y S E +++ ++GY T SS N YS+ S Y
Sbjct: 4 SGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSGY 63
Query: 346 HSGYNGYSGQSSTN 387
Y GY Q ++
Sbjct: 64 SQSYGGYENQKQSS 77
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 172 SGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYN--TQSSALSNGGTYSASDSQSSRY 345
SG+Y S E +++ ++GY T SS N YS+ S Y
Sbjct: 4 SGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSGY 63
Query: 346 HSGYNGYSGQSSTN 387
Y GY Q ++
Sbjct: 64 SQSYGGYENQKQSS 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,177,125
Number of Sequences: 237096
Number of extensions: 1095638
Number of successful extensions: 1786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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