Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_I12
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 32 1.6
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 32 1.6
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 32 1.6
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 3.7
U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein. 30 4.8
M64594-1|AAA63230.1| 610|Homo sapiens mucin protein. 30 6.4
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 29 8.5
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 29 8.5
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 29 8.5
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 8 PNTITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTTI 127
P TT ++PT TT R T T+ ++P T +TT+
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTV 166
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 14 TITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTT 124
T T ++ SIPT TT T +T+ S+P T + TT
Sbjct: 163 TTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT 199
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 8 PNTITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTTI 127
P TT ++PT TT R T T+ ++P T +TT+
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTV 166
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 14 TITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTT 124
T T ++ SIPT TT T +T+ S+P T + TT
Sbjct: 163 TTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT 199
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 14 TITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTT 124
T T ++ SIPT TT T +T+ S+P T + TT
Sbjct: 158 TTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTT 194
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 20 TTGSSRSIPT-ATTSRAIPTTATSNSIPGTAACSTTIARA 136
TT +S + T ATT+RA +T+T +S PGT T + A
Sbjct: 450 TTHTSTVLTTEATTTRATSSTSTPSSTPGTTCILTELTTA 489
>U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein.
Length = 328
Score = 30.3 bits (65), Expect = 4.8
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 2 SKPNTITTGSSRSIPTATTSRAIPTTATSNSIPGTA 109
S P T T S+ TATT+RA + AT +S PGTA
Sbjct: 133 STPETAHT-STVLTTTATTTRATGSVATPSSTPGTA 167
>M64594-1|AAA63230.1| 610|Homo sapiens mucin protein.
Length = 610
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 11 NTITTGSSRSIPTATTSRAIPTTATSNSIPGTAACSTTIA 130
++++TG + S+P TS A + ATS + T++ ST+ A
Sbjct: 2 SSVSTGHATSLPVTDTSSASTSHATSLPVTDTSSASTSHA 41
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 SKPNTITTGSSRSIPTA--TTS-RAIPTTATSNSIPGTAACSTTIARARYP 145
S P T TT + P+A TTS ++PTT+T+++ + +TT +R P
Sbjct: 146 SAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGP 196
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 20 TTGSSRSIPT-ATTSRAIPTTATSNSIPGTAACSTTIARA 136
TT +S + T ATT+RA +T+T +S PGT T + A
Sbjct: 190 TTHTSTVLTTKATTTRATSSTSTPSSTPGTTWILTELTTA 229
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 20 TTGSSRSIPT-ATTSRAIPTTATSNSIPGTAACSTTIARA 136
TT +S + T ATT+RA +T+T +S PGT T + A
Sbjct: 141 TTHTSTVLTTKATTTRATSSTSTPSSTPGTTWILTELTTA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,958,755
Number of Sequences: 237096
Number of extensions: 885500
Number of successful extensions: 2318
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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