Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I11
         (364 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22R56 Cluster: Putative uncharacterized protein; n=1; ...    34   0.89 
UniRef50_Q2LSS5 Cluster: DNA repair protein; n=1; Syntrophus aci...    33   1.2  
UniRef50_A0CDR6 Cluster: Chromosome undetermined scaffold_17, wh...    32   2.7  
UniRef50_Q1RS63 Cluster: Polyketide synthase type I; n=2; Bacill...    32   3.6  
UniRef50_Q09F38 Cluster: Ymf67; n=1; Tetrahymena paravorax|Rep: ...    32   3.6  
UniRef50_UPI00006CBD03 Cluster: Dual specificity phosphatase, ca...    31   6.3  
UniRef50_A5ZNU4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_A5G644 Cluster: Beta-ketoacyl synthase; n=1; Geobacter ...    31   6.3  
UniRef50_Q54W13 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_UPI00006CFA6B Cluster: cyclic nucleotide-binding domain...    31   8.3  
UniRef50_Q4YRG0 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  
UniRef50_A7THP2 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  

>UniRef50_Q22R56 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2395

 Score = 33.9 bits (74), Expect = 0.89
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = -2

Query: 234  VHNLQSQSVHNKYSYYTIGRRYKVSSLVTLVASYMMPFCNNLYFG*NICYIQSKVTKCSF 55
            + NLQS SV+N Y YY + ++ + S++ T  AS+ +    NLYF   I Y Q++   C+ 
Sbjct: 2105 ITNLQSSSVYNIY-YYCLNQQPQASAVQT--ASFQI----NLYFSDMITYAQNQDIACAM 2157

Query: 54   IKPNNL 37
             +  +L
Sbjct: 2158 TQAFSL 2163


>UniRef50_Q2LSS5 Cluster: DNA repair protein; n=1; Syntrophus
           aciditrophicus SB|Rep: DNA repair protein - Syntrophus
           aciditrophicus (strain SB)
          Length = 308

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 11/44 (25%), Positives = 29/44 (65%)
 Frame = +1

Query: 7   HKSDVSGMYDKIIRFYKTTFSYFTLYVTDILTKVKVITKWHHVG 138
           H++ ++G++ + +RF ++T ++F +  T+ +T    I + H++G
Sbjct: 46  HRAPLAGLHPRYLRFSQSTPAHFVILTTESMTPTPEIPEPHYIG 89


>UniRef50_A0CDR6 Cluster: Chromosome undetermined scaffold_17, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_17,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 164

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -2

Query: 312 RNTNKLKQSNQ--QRFQYLRLFKVKITLVHNLQSQSVHNKYSYYTIGRRYKVSSL 154
           +   K+K+SN       +L L   +  ++HN+  QSVH   +Y+ I +  K+ SL
Sbjct: 100 KQVQKIKKSNLPIDTQVFLLLHYNQNVIIHNISPQSVHQYTNYFQIDQNIKIRSL 154


>UniRef50_Q1RS63 Cluster: Polyketide synthase type I; n=2;
           Bacillus|Rep: Polyketide synthase type I - Bacillus
           amyloliquefaciens
          Length = 2334

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +3

Query: 177 DQLCNTSTCCVHFVTVGCEQGLF*L*INGGIETSV---DWTVLTYLYFEATRGSCNCY 341
           D +C++S   VHF     ++G   L I GG+  S+    +T+L+  +F ++ G C  +
Sbjct: 812 DTMCSSSLSAVHFACESLKRGESTLAIAGGVNLSLHPDKYTLLSQNHFVSSDGRCRSF 869


>UniRef50_Q09F38 Cluster: Ymf67; n=1; Tetrahymena paravorax|Rep:
           Ymf67 - Tetrahymena paravorax
          Length = 445

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = -2

Query: 315 LRNTNKLKQSNQQRFQYLRLFK-VKITLVHNLQSQSVHNKYSYYTIGRRYKVSSLVTLVA 139
           L NTN +  +       L L K +KIT ++N+ +   +N Y YY   + Y   +L+   A
Sbjct: 191 LNNTNLIINNTNN----LNLNKHIKITKIYNIINTKFNNNYYYYNTLQAYINKNLIKFDA 246

Query: 138 SYMMPFCNNLYFG*NICYIQSKVTKCSFIKPNNL 37
           +    F NNL    NI +  + + K  +I  N++
Sbjct: 247 T----FLNNLKSRYNISFSATNIVK--YISNNSI 274


>UniRef50_UPI00006CBD03 Cluster: Dual specificity phosphatase,
           catalytic domain containing protein; n=1; Tetrahymena
           thermophila SB210|Rep: Dual specificity phosphatase,
           catalytic domain containing protein - Tetrahymena
           thermophila SB210
          Length = 824

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = -2

Query: 219 SQSVHNKYSYYTIGRRYKVSSLVTLVASYMMPFCNNLYFG*NICYIQSKVTKCSFIKPNN 40
           SQ   NK + Y  G  Y  S+   ++++     C++ YFG  +   Q ++  C+FI   +
Sbjct: 436 SQFYRNK-ALYNGGAIYSQSTFPLIISNVTFDSCSSEYFGGAVMAYQLQIINCTFINQKS 494

Query: 39  LV 34
            +
Sbjct: 495 KI 496


>UniRef50_A5ZNU4 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 607

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -2

Query: 315 LRNTNKLKQSN---QQRFQYLRLFKVKITLVHNLQSQSVHNKYSYYTIGRRYKVSSLVTL 145
           +R  N+    N   QQR + LRL K  I  +H+L S+  +NK     +  RY    L+ +
Sbjct: 264 IRRKNRANWENWNEQQRKEALRLQKDAINYMHSLPSKRANNKEYKSLVYCRYADDFLIGV 323

Query: 144 VASY 133
           + S+
Sbjct: 324 IGSF 327


>UniRef50_A5G644 Cluster: Beta-ketoacyl synthase; n=1; Geobacter
            uraniumreducens Rf4|Rep: Beta-ketoacyl synthase -
            Geobacter uraniumreducens Rf4
          Length = 4869

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 177  DQLCNTSTCCVHFVTVGCEQGLF*L*INGGIETSV---DWTVLTYLYFEATRGSCNCY 341
            D +C++S   +HF   G  +G   + I GG+  S+    + +L+   F +++G C  +
Sbjct: 3314 DTMCSSSLTAIHFACQGIRRGECEVAIAGGVNVSIHPNKYLMLSQSGFLSSKGKCESF 3371


>UniRef50_Q54W13 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 2274

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -3

Query: 317 SFEIQIS*NSPINRGFNTSVYLKSK*PLFTTYSHKVYTTSTRITQLVVDIKFP 159
           +F+++ + NSPIN   NT+V   +  P  TT +    TTST  T     IK P
Sbjct: 598 AFKLKSNSNSPINTTPNTNVNNNNN-PTTTTTTTSTTTTSTVSTSTTPTIKIP 649


>UniRef50_UPI00006CFA6B Cluster: cyclic nucleotide-binding domain
            containing protein; n=1; Tetrahymena thermophila
            SB210|Rep: cyclic nucleotide-binding domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1229

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 309  NTNKLKQSNQQRFQYLRLFKVKITLVHNLQSQSVHNKYSYYTIGRRYKVSSLVTL 145
            NTN L  SN+++ Q+L   K K    + +QS + + + + Y   + Y++ S + L
Sbjct: 1135 NTNHLTNSNKKQIQFL---KQKFQDFNQIQSTTANQQNALYQSSKNYELKSKIEL 1186


>UniRef50_Q4YRG0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 436

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 309 NTNKLKQSNQQRFQYLRLFKVKITL--VHNLQSQSVHNKYSYYTI 181
           N NK    +   F  L+LF  KI L  + NLQ+  +H+ ++++TI
Sbjct: 355 NNNKYINISSLPFDALKLFYNKIILENLDNLQTTQIHSSFAHHTI 399


>UniRef50_A7THP2 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 442

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -2

Query: 354 FCDNCNSYRIPW*LRNTNKLKQSNQQRFQYLRLFKVKITLVHNLQSQSVHNKYSYYTIGR 175
           FC +CN  ++   + N  K    N    +YL L +V++ +    +++ + N+YS+    R
Sbjct: 188 FCSHCNPDKV---IPNLEKTVHMNIYE-KYLPLERVQLDIFEPFENEKIQNRYSHIIYIR 243

Query: 174 RYK 166
            Y+
Sbjct: 244 DYR 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,482,136
Number of Sequences: 1657284
Number of extensions: 5361544
Number of successful extensions: 13070
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13069
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)