Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I11
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.12 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.64 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   1.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   2.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   5.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   5.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   5.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   5.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 237 LVHNLQ--SQSVHNKYSYYTIGR 175
           ++HN Q   +S+HN Y  +T GR
Sbjct: 575 MIHNAQVNKRSIHNNYPVHTFGR 597


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
 Frame = -2

Query: 315 LRNTNKLK---QSNQQRFQYLRL--FKVKITLVHNLQSQSVHNKYSYYT--------IGR 175
           LRN N+L+   +  QQ  + + L  F  +  +V  L S    N+ ++          +G+
Sbjct: 13  LRNRNQLQHVLEETQQALELINLENFFPEENVVEELLSPLTLNRITHILANSPAIIILGQ 72

Query: 174 RYKVSSLV--TLVASYMMPFCNNLYFG*NICYIQS 76
             K  ++V  TL+++ ++P CN L+    + Y Q+
Sbjct: 73  DSKAKAIVVNTLISNDILPVCNGLWRWIRLTYGQT 107


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 204 NKYSYYTIGRRYKVSSLV--TLVASYMMPFCNNLYFG*NICYIQS 76
           N  +   +G+  K  ++V  TL+++ ++P CN L+    + Y Q+
Sbjct: 25  NSPAIIILGQDSKAKAIVVNTLISNDILPVCNGLWRWIRLTYGQT 69


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 10  KSDVSGMYDKIIRFYKTTFSYFTLYVTDILTKVKVI 117
           K D +G+Y        T F Y   YV  ++ KV  I
Sbjct: 265 KRDAAGIYGSNSSTVGTIFGYQGTYVNLVIVKVFTI 300


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 345 NCNSYRIPW*LRNTNKLKQSNQQRFQYLRLFKVKITLVHNLQSQSVHNKYSYYTI 181
           N NSYR     R T+K +  ++   +  R  K+  +L +N    + +NK  YY I
Sbjct: 285 NENSYRK---YRETSKERSRDRIERERSREPKIISSLSNNTIHNNNYNKKLYYNI 336


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 105 SKGYYKMASCRMQLTLLNWK 164
           SKG Y+M++  M+  +  W+
Sbjct: 404 SKGEYRMSTGEMKEAITQWQ 423


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 241 NPCSQPTVTKCTQQV 197
           NPC+  T   CT ++
Sbjct: 433 NPCTHTTTNGCTAEL 447


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 241 NPCSQPTVTKCTQQV 197
           NPC+  T   CT ++
Sbjct: 419 NPCTHTTTNGCTAEL 433


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 241 NPCSQPTVTKCTQQV 197
           NPC+  T   CT ++
Sbjct: 453 NPCTHTTTNGCTAEL 467


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 241 NPCSQPTVTKCTQQV 197
           NPC+  T   CT ++
Sbjct: 402 NPCTHTTTNGCTAEL 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,906
Number of Sequences: 438
Number of extensions: 1892
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)