Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I05
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    26   0.19 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 216 VFNSEVQNLNFGKNEEAANIINTWVEDHTNK-RIKNLVDPSSLDSSTQCVL-VNAIYFK 386
           VF S    L F   +E  + +  ++EDHT +  +K  +   S+D  + C   +N   F+
Sbjct: 133 VFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVDIISTCAFGINTYCFR 191


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 48  LLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANK 158
           LLK   F  DN+ K +     + ++++ G ++K   K
Sbjct: 115 LLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRK 151


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 400 SFQLPLK*IAFTRTHCVLLSNELGSTKFL 314
           +F  P+K +AF  T  V+   + GS  FL
Sbjct: 57  AFVAPVKCLAFFCTALVIFYCQEGSVDFL 85


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 400 SFQLPLK*IAFTRTHCVLLSNELGSTKFL 314
           +F  P+K +AF  T  V+   + GS  FL
Sbjct: 290 AFVAPVKCLAFFCTALVIFYCQEGSVDFL 318


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 400 SFQLPLK*IAFTRTHCVLLSNELGSTKFL 314
           +F  P+K +AF  T  V+   + GS  FL
Sbjct: 290 AFVAPVKCLAFFCTALVIFYCQEGSVDFL 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,433
Number of Sequences: 336
Number of extensions: 2671
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)