Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I05
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.52 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.8  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   8.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.4  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   8.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = +3

Query: 144 KLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKR---I 314
           KL  K      N  ND +     +  NS   ++ F +N+E    IN    D+ + +   +
Sbjct: 125 KLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDNQEVSM 184

Query: 315 KNLVDPSSLDSSTQ 356
           +N  + S  DS  +
Sbjct: 185 ENTENKSCTDSDIE 198


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 37  DSPVEAIASWAN 2
           D  VEA+A WAN
Sbjct: 338 DKNVEALAKWAN 349


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 425 LCQFLIKFVFPTSLKVNCIYE 363
           +  FL+ F     + +NC YE
Sbjct: 96  ISNFLMMFCMSPPMVINCYYE 116


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 240 LNFGKNEEAANIINTWVEDHTNKRIKNLVDP 332
           L F +  E   I+  W++    + I  L DP
Sbjct: 59  LRFEEVSEKYGILQNWMDKFRGEEIAILYDP 89


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 470 RDLYCFIFVNMEW 432
           RDLYC I   + W
Sbjct: 684 RDLYCGIRAGLSW 696


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 470 RDLYCFIFVNMEW 432
           RDLYC I   + W
Sbjct: 722 RDLYCGIRAGLSW 734


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 425 LCQFLIKFVFPTSLKVNCIYE 363
           +  FL+ F     + +NC YE
Sbjct: 62  ISDFLMMFCMSPPMVINCYYE 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,717
Number of Sequences: 438
Number of extensions: 3252
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)