Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_I02
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000635-1|BAA91300.1|  477|Homo sapiens protein ( Homo sapiens ...    30   5.7  
BC000961-1|AAH00961.1|  323|Homo sapiens degenerative spermatocy...    29   7.6  
AY423730-1|AAS00493.1|  323|Homo sapiens migration-inducing gene...    29   7.6  
AF466375-1|AAM12531.1|  323|Homo sapiens sphingolipid delta 4 de...    29   7.6  
AF002668-1|AAB62238.1|  323|Homo sapiens MLD protein.                  29   7.6  

>AK000635-1|BAA91300.1|  477|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20628 fis, clone KAT03903. ).
          Length = 477

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 9   GELSGNVVNEGYNFGYMYHNGIPYPVRPNHFHLDHPEYLGELEKIK 146
           GEL     +E  +F + Y    PY  RP H+   H  +L +L K+K
Sbjct: 429 GELFQEDDHEESHFDFPY-GSFPYVARPVHWQPGHTAFLVKLRKVK 473


>BC000961-1|AAH00961.1|  323|Homo sapiens degenerative spermatocyte
           homolog 1, lipid desaturase (Drosophila) protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 69  GIPYPVRPNHFHLDHPEYLG 128
           GIPY +    +H+DH  YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136


>AY423730-1|AAS00493.1|  323|Homo sapiens migration-inducing gene 15
           protein protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 69  GIPYPVRPNHFHLDHPEYLG 128
           GIPY +    +H+DH  YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136


>AF466375-1|AAM12531.1|  323|Homo sapiens sphingolipid delta 4
           desaturase protein DES1 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 69  GIPYPVRPNHFHLDHPEYLG 128
           GIPY +    +H+DH  YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136


>AF002668-1|AAB62238.1|  323|Homo sapiens MLD protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 69  GIPYPVRPNHFHLDHPEYLG 128
           GIPY +    +H+DH  YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,707,363
Number of Sequences: 237096
Number of extensions: 1526153
Number of successful extensions: 6831
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6831
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)