Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H24
         (238 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.34 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   0.78 
S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.           21   2.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   2.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   4.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    19   7.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   9.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 0.34
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 228 PHSTTDGENMIKFLYEIFPIFRQHQVSHHR 139
           PH   D E +IK +Y++ P   +  +  HR
Sbjct: 352 PHKVYDFELLIKGVYQVNPTKTRTNLPTHR 381


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 0.78
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 195 KFLYEIFPIFRQHQVSHHRQA*TS-SYNRALAKI*R 91
           +F+ ++FP +RQ+Q         S S+N    K+ R
Sbjct: 168 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPR 203


>S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.
          Length = 35

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 131 ERQAITALLQRFKELRMSLP 72
           ERQ   +L + F  LR S+P
Sbjct: 5   ERQRTQSLNEAFASLRKSIP 24


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 131 ERQAITALLQRFKELRMSLP 72
           ERQ   +L + F  LR S+P
Sbjct: 105 ERQRTQSLNEAFASLRKSIP 124


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 4.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 216 TDGENMIKFLYEIFPIF 166
           TD  N   + YE+ P+F
Sbjct: 153 TDALNPSVYTYEVSPVF 169


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 218 PPTVKI*LSSYMKYSP 171
           PP  ++ LSS  KY P
Sbjct: 132 PPQGQLVLSSMHKYQP 147


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 93  RIENESPLYLDYLPILKF 40
           +I+N +  Y + +PIL F
Sbjct: 940 QIDNWTSFYYNIIPILFF 957


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 93  RIENESPLYLDYLPILKF 40
           +I+N +  Y + +PIL F
Sbjct: 940 QIDNWTSFYYNIIPILFF 957


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 93  RIENESPLYLDYLPILKF 40
           +I+N +  Y + +PIL F
Sbjct: 940 QIDNWTSFYYNIIPILFF 957


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 93  RIENESPLYLDYLPILKF 40
           +I+N +  Y + +PIL F
Sbjct: 940 QIDNWTSFYYNIIPILFF 957


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,050
Number of Sequences: 336
Number of extensions: 987
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3428128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)