Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H24
         (238 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81999-1|CAA57525.1|  449|Drosophila melanogaster oligosaccharyl...    66   8e-12
BT010050-1|AAQ22519.1|  449|Drosophila melanogaster LD21941p pro...    66   8e-12
AE014298-1289|AAF46453.1|  449|Drosophila melanogaster CG9022-PA...    66   8e-12
AE014296-2224|AAF49861.2|  702|Drosophila melanogaster CG11262-P...    27   4.6  
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    26   6.1  

>X81999-1|CAA57525.1|  449|Drosophila melanogaster
           oligosaccharyltransferase subunit protein.
          Length = 449

 Score = 65.7 bits (153), Expect = 8e-12
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 12  CLSLSLADQKTLVLVDNLNIRETHSQFFKSLQERGYSLTFKLADDA 149
           C ++   D  TLVL+DNL IRETHS FFKSLQ+RG+ LT+KLADD+
Sbjct: 16  CQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDS 61



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 173 GNISYKNLIIFSPSVVECGGQI 238
           G   YKN+IIF+PSV E GG +
Sbjct: 69  GEYLYKNVIIFAPSVEEFGGDV 90


>BT010050-1|AAQ22519.1|  449|Drosophila melanogaster LD21941p
           protein.
          Length = 449

 Score = 65.7 bits (153), Expect = 8e-12
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 12  CLSLSLADQKTLVLVDNLNIRETHSQFFKSLQERGYSLTFKLADDA 149
           C ++   D  TLVL+DNL IRETHS FFKSLQ+RG+ LT+KLADD+
Sbjct: 16  CQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDS 61



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 173 GNISYKNLIIFSPSVVECGGQI 238
           G   YKN+IIF+PSV E GG +
Sbjct: 69  GEYLYKNVIIFAPSVEEFGGDV 90


>AE014298-1289|AAF46453.1|  449|Drosophila melanogaster CG9022-PA
           protein.
          Length = 449

 Score = 65.7 bits (153), Expect = 8e-12
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 12  CLSLSLADQKTLVLVDNLNIRETHSQFFKSLQERGYSLTFKLADDA 149
           C ++   D  TLVL+DNL IRETHS FFKSLQ+RG+ LT+KLADD+
Sbjct: 16  CQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDS 61



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 173 GNISYKNLIIFSPSVVECGGQI 238
           G   YKN+IIF+PSV E GG +
Sbjct: 69  GEYLYKNVIIFAPSVEEFGGDV 90


>AE014296-2224|AAF49861.2|  702|Drosophila melanogaster CG11262-PA
           protein.
          Length = 702

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 198 IKFLYEIFPIFRQHQVSHHRQA*TSSYNRALAKI*RI-ENESPLYLD 61
           +KFL +IF +    Q+   RQA  SS+  ++ +  R+ E   P YLD
Sbjct: 1   MKFLSDIFRVADLCQIDGVRQAWPSSHQSSIPRRLRMPEQPEPNYLD 47


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -3

Query: 182 KYSPYLDSTRFRI--IGKLERQAITALLQRFKELR 84
           K SP L+S  +R+  +   E+Q + ALLQ++ +++
Sbjct: 150 KISPILESDLYRLEHLNNEEKQRLCALLQKYHDIQ 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,044,996
Number of Sequences: 53049
Number of extensions: 154417
Number of successful extensions: 268
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)