Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H21
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    29   1.2  
AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...    29   1.6  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   3.8  
AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical...    27   5.0  
AC087081-14|AAK66032.1|  250|Caenorhabditis elegans Hypothetical...    27   5.0  
Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical...    27   8.7  

>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQR*NWC 150
           QCQ  +    AKY      Q+C+  +  H Q+  WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 289 LNEWCIELLPTGVEVQRRGGRLEKIQFSAQRVV-VAVKDIGVCGGRRCTNFIFEHV 125
           + +W  +L  + ++ +     L K++   +R+  V VK+IG+  G R  +FIF  +
Sbjct: 235 IKDWDSKLEISEIDAKNLTESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRI 290


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 111 VPEWTTCSKIKL-VHLRPPHTPMSLT 185
           V E   C K+K+ V+ +PPH P+ +T
Sbjct: 258 VREKKNCDKLKINVYFKPPHPPVEIT 283


>AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.3 protein.
          Length = 252

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 452 FLFFTIKLKVYYYLCTKTYNS 390
           F+FFTI    Y YLCT T +S
Sbjct: 152 FIFFTIMEVYYIYLCTWTNSS 172


>AC087081-14|AAK66032.1|  250|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.5 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 449 LFFTIKLKVYYYLCTKTYNS 390
           LFFTI    Y YLCT T++S
Sbjct: 150 LFFTIMEVYYIYLCTWTHHS 169


>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 74  PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 175
           P +PQ  ++    +G+   F D  GASA+++ TD
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184


>Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical
           protein H02I12.4 protein.
          Length = 303

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 75  QIFLKFRTSTLSVPEWTTCSKIKLVHLRPPH-TPMSLTATTTLWAE 209
           ++ +K+   TL   +   CS    VHLR PH  P ++  +T +  E
Sbjct: 2   KLIIKYTVLTLFYAQLINCSGYLEVHLRSPHEQPATVNISTDVQNE 47


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
            F40H6.5 protein.
          Length = 1288

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 123  TTCSKIKLVHLRPPHTPMSLTATTT 197
            +T   + +  +RPP TP + T+TTT
Sbjct: 1140 STIDTVSMACVRPPTTPTTTTSTTT 1164


>AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.2 protein.
          Length = 235

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 452 FLFFTIKLKVYYYLCTKTYNS 390
           F FFTI    Y YLCT T+ S
Sbjct: 135 FTFFTIMEVYYIYLCTWTHPS 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,232,615
Number of Sequences: 27780
Number of extensions: 215965
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)