Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H16
(218 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 27 1.4
U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical pr... 26 4.2
U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine re... 25 7.3
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 25 7.3
AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine re... 25 7.3
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 25 9.6
U53155-6|AAM48562.1| 119|Caenorhabditis elegans Spermathecal ex... 25 9.6
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 25 9.6
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 25 9.6
AB072927-1|BAB69890.1| 119|Caenorhabditis elegans novel protein... 25 9.6
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 82 PEYQAFWHFVPISARGSTSLDAA 14
PE++A WH + GST+L A
Sbjct: 178 PEFKAIWHVTVVHPTGSTALSNA 200
>U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical
protein C06A8.1b protein.
Length = 642
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 101 LQQCSVTGVPGFLALRADLSPG 36
L+Q G+ LALR DL PG
Sbjct: 135 LEQAKAMGLRSILALRGDLPPG 156
>U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical
protein C06A8.1a protein.
Length = 663
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 101 LQQCSVTGVPGFLALRADLSPG 36
L+Q G+ LALR DL PG
Sbjct: 156 LEQAKAMGLRSILALRGDLPPG 177
>AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine
receptor, class t protein1 protein.
Length = 346
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 72 WYSGHATLLKLYLDRNIRNNMAAAVV 149
W SG +++ L L+R+IRN++ ++
Sbjct: 282 WSSGSLSIVYLSLNRSIRNSVIKMII 307
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 182 QPGASRYPFTDNDSGCHVVANIPVEIQLQQCSVTGVPGFLALRADLSP 39
+P A+R D +V IP + + C V VP L +L+P
Sbjct: 640 KPSATRVTGIDESKVYNVGEKIPFRVDTRLCGVDLVPKVEILDPELNP 687
>AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine
receptor, class t protein2 protein.
Length = 346
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 72 WYSGHATLLKLYLDRNIRNNMAAAVV 149
W SG +++ L L+R+IRN++ ++
Sbjct: 282 WSSGSLSIVYLSLNRSIRNSVIKMII 307
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 158 KDIEKPQAEIFTDPSYQDH 214
K+ EKP + +P Y+DH
Sbjct: 17 KNDEKPAKSVLLEPKYRDH 35
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 158 KDIEKPQAEIFTDPSYQDH 214
K+ EKP + +P Y+DH
Sbjct: 17 KNDEKPAKSVLLEPKYRDH 35
>U53155-6|AAM48562.1| 119|Caenorhabditis elegans Spermathecal
expression protein 1 protein.
Length = 119
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 12 VAASKLVDPRAEIGTKCQKAW 74
V SKLV P AE TK ++ W
Sbjct: 13 VVTSKLVFPVAEFRTKWERLW 33
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 158 KDIEKPQAEIFTDPSYQDH 214
K+ EKP + +P Y+DH
Sbjct: 17 KNDEKPAKSVLLEPKYRDH 35
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 158 KDIEKPQAEIFTDPSYQDH 214
K+ EKP + +P Y+DH
Sbjct: 17 KNDEKPAKSVLLEPKYRDH 35
>AB072927-1|BAB69890.1| 119|Caenorhabditis elegans novel protein
protein.
Length = 119
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 12 VAASKLVDPRAEIGTKCQKAW 74
V SKLV P AE TK ++ W
Sbjct: 13 VVTSKLVFPVAEFRTKWERLW 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,882,273
Number of Sequences: 27780
Number of extensions: 80969
Number of successful extensions: 182
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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