Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H16
         (218 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   0.24 
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   0.43 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   4.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.9  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    19   9.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   9.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   9.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   9.2  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.8 bits (49), Expect = 0.24
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 106 ISTGIFATTWQPLSLSV 156
           I TG     WQPLS+S+
Sbjct: 748 IQTGANVNLWQPLSVSI 764


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 23.0 bits (47), Expect = 0.43
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 137 CHVVANIPVEIQLQQC 90
           CH +  IPV IQL  C
Sbjct: 14  CHSIIQIPVIIQLPFC 29


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -1

Query: 140 GCHVVANIPVEIQLQQCS 87
           GCH       +++ Q+C+
Sbjct: 246 GCHCKPGYQADVEKQECT 263


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 218 QRDPDTMDR*RSQPGASRYPFTDNDS 141
           +R PD  D    +P     P  +ND+
Sbjct: 181 RRTPDPHDETAKKPRVLSPPLNNNDA 206


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 122 NIPVEIQLQQCSVT 81
           ++P+E+Q+Q+ S T
Sbjct: 782 DVPIELQIQKQSHT 795


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 149  CQ*KDIEKPQAEIFTDPS 202
            CQ   + + Q  I TDPS
Sbjct: 973  CQPGGVVQSQQPIMTDPS 990


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = +2

Query: 95  VEVVSRPEYSQQHGSRCR 148
           +  ++ P Y Q+   RC+
Sbjct: 335 IYAINHPRYRQELQKRCK 352


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +1

Query: 115 GIFATTWQPLSLSVKG 162
           G+F + +QP  +++ G
Sbjct: 364 GVFLSLYQPQGMNILG 379


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 60  CQKAWYSGHATLLKLYL 110
           CQ  +Y  +ATL   Y+
Sbjct: 197 CQNFFYQIYATLGSFYI 213


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = +2

Query: 95  VEVVSRPEYSQQHGSRCR 148
           +  ++ P Y Q+   RC+
Sbjct: 335 IYAINHPRYRQELQKRCK 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,861
Number of Sequences: 438
Number of extensions: 941
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)