Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H15
(526 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 90 2e-19
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 6e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 2e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 38 7e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 38 0.001
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.011
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 34 0.011
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 33 0.020
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 33 0.026
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.026
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 32 0.046
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 31 0.11
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.14
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.56
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 0.74
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 1.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.3
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 1.3
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 1.3
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 1.7
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 1.7
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 1.7
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 4.0
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 5.2
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 6.9
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.1
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 9.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 89.8 bits (213), Expect = 2e-19
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 52 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV--GKGDGQREFTGLGNCISKIFKSD 225
++F SL FVY LD+ARTRLA D K G+R+F GL + K ++SD
Sbjct: 130 KWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSD 189
Query: 226 GLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
GL GLYRGFG SV GI++YR YFG Y+
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYD 217
Score = 49.2 bits (112), Expect = 4e-07
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +3
Query: 324 MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHC*AT 503
+L P + S+ + VTT +G+ SYP DT+RRRMMM SG A + Y ++ C
Sbjct: 223 VLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQ 279
Query: 504 IAKTEG 521
I EG
Sbjct: 280 ILAKEG 285
Score = 25.0 bits (52), Expect = 6.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 181 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGF 303
+ G+G C + +G+ L+RG +V +A F F
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAF 111
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 112 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 249
+YPLD +TR+ VGK D + G +C+ KI K++G LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 97 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 276
T V P + + RL DV ++ G +C +KI K + + LY GF ++ +
Sbjct: 117 TETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWRHV 172
Query: 277 IYRAAYFG 300
++ A YFG
Sbjct: 173 VWNAGYFG 180
Score = 33.5 bits (73), Expect = 0.020
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 342 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHC*ATIAKTE 518
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 519 G 521
G
Sbjct: 60 G 60
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.9 bits (89), Expect = 2e-04
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 109 FVYPLDFARTRL-AADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYR 285
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYS 302
Query: 286 AAYFGFYE 309
A G +E
Sbjct: 303 ATDLGTFE 310
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 38.3 bits (85), Expect = 7e-04
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 115 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 294
YP + RTRL +G ++TGL C ++ G+ GLY G + ++
Sbjct: 291 YPHEVVRTRLRQSPSI-NGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACIL 349
Query: 295 FGFYE 309
FG YE
Sbjct: 350 FGSYE 354
Score = 33.9 bits (74), Expect = 0.015
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 118 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGI 273
P+ +TRL D G + + + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 112 VYPLDFARTRLAAD-----VGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 276
V PLD +TR A G G G + + IF ++G+ GLYRG G + G +
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 277 IYRAAYFGFYE 309
+ YF YE
Sbjct: 83 PSWSIYFVVYE 93
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 208 KIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
KI+K +GL YRG S+ G ++ F YE
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYE 271
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 187 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
G+ + + ++KS+GL GL+RGFG + + F FYE
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 181 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
+T + + I I+K +G++G +RGFGV+ + Y FYE
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYE 183
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.5 bits (73), Expect = 0.020
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +3
Query: 294 FRFLRNTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL 473
+ ++ + + LP + V ++ + + + P DTV+ RM QS A +
Sbjct: 184 YNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE-- 239
Query: 474 YKNTIHC*ATIAKTEG 521
YKN+IHC I +G
Sbjct: 240 YKNSIHCAYKILTQDG 255
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 33.1 bits (72), Expect = 0.026
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 106 CFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 249
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG 265
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.026
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 118 PLDFARTR--LAADVGKGD-GQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRA 288
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 289 AYFGFYE 309
GFYE
Sbjct: 103 CRLGFYE 109
Score = 28.3 bits (60), Expect = 0.74
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 196 NCISKIFKSDGLTGLYRGFGVSVQGI 273
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 414 FDTVRRRMMMQSGRAKSDILYKNTIHC*ATIAKTEG 521
FDTV RM Q K+ LYKN I C ++EG
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEG 281
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 32.3 bits (70), Expect = 0.046
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 387 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHC*ATIAKTEG 521
T++ PFD +++RM + S + YK+ +HC T+ + EG
Sbjct: 125 TISDAFMTPFDVIKQRMQLPSRK------YKSALHCATTVFRNEG 163
Score = 30.3 bits (65), Expect = 0.18
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 112 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 291
+YP+D +TR+ + G + + N + KI ++G+ L+RG + G A
Sbjct: 37 MYPVDAIKTRM--QMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAI 94
Query: 292 YFGFYE 309
YF E
Sbjct: 95 YFSVLE 100
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 175 REFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFY 306
+E+T L + + KI+ +GL G +RG G + Y A F +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATF 97
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 115 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 294
+P D R R + G G + + + I I+K++G+ G +RG+ ++ II +
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSIT 303
Query: 295 FGFYE 309
+ YE
Sbjct: 304 WYTYE 308
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 30.7 bits (66), Expect = 0.14
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 181 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
F + +C K++GL GLYRG + + + R+ F Y+
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYD 92
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 28.7 bits (61), Expect = 0.56
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 100 SLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIII 279
S ++PLD A+ ++ A + + D + F S I + + LY G ++V G
Sbjct: 14 STLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAA 69
Query: 280 YRAAYFGFYE 309
AYF Y+
Sbjct: 70 SWGAYFCIYD 79
Score = 25.0 bits (52), Expect = 6.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 211 IFKSDGLTGLYRGFGVSVQGI 273
+ K++GL G Y GF S+ G+
Sbjct: 143 LIKNEGLRGCYAGFAPSLLGV 163
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 28.3 bits (60), Expect = 0.74
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 196 NCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
N IS + +S+GL G YRG+ + V + +++ YE
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYE 158
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 187 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
G G ++I+K G +GL+ G GV + I A + Y+
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYD 298
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 211 IFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
I +GL GLY G ++ G + +GFYE
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYE 100
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 236 VCTEVSVYPYRASLSTVRHISVSTKHGARHVARPE 340
+C+E +YPY+ L+++ ++ V+ K A + PE
Sbjct: 382 ICSERDLYPYQMKLASLENLRVNGKFLASDHSVPE 416
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 202 ISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYE 309
+ +I+K +G+ G +G G+ V + + Y G YE
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYE 241
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 351 WGCSSGRATCRAPCFVETEICRTVD-NDALYGYTETSV 241
W S G C +PCF IC+ V LY Y ++ +
Sbjct: 2313 WNPSEGPGPCASPCFYIALICQFVAVGGLLYHYRKSQL 2350
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 196 NCISKIFKSDGLTGLYRGFGVSVQGI 273
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 115 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGF 252
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 27.1 bits (57), Expect = 1.7
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Frame = +1
Query: 100 SLCFVYPLDFARTRLA--ADVGKGDGQREFT-GLGN-----CISK---IFKSDGLTGLYR 246
S+ F YPL+ R RLA + GK + T + + C K + + + YR
Sbjct: 130 SVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYR 189
Query: 247 GFGVSVQGIIIYRAAYFGFYE 309
GF V++ GI Y F Y+
Sbjct: 190 GFSVTLTGIFPYAGMSFLAYD 210
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/84 (27%), Positives = 31/84 (36%)
Frame = +1
Query: 115 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 294
YPLD RT+ A+ K T KI+ G+ G + G SV I Y +
Sbjct: 123 YPLDTMRTKFAS-YAKTPHMLPAT------KKIYAEAGIKGFFPGLKFSVIQIGPYAGCF 175
Query: 295 FGFYEXXXXXXXXXXXXXXSSSAG 366
F FY S+ +G
Sbjct: 176 FMFYRASEAVLSPLGLALSSTLSG 199
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 321 GMLPDPKNTPIVISWAIAQTVTTV 392
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 270 ALYGYTETSVQTSEAIRLEDLADAVTET 187
ALY YTE +Q +E ++LAD VTE+
Sbjct: 2390 ALYRYTE--LQEAERKSQQELADLVTES 2415
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 370 SRKPSPQSPVSSRIHSTR 423
SRKP P SP +R HS R
Sbjct: 84 SRKPLPASPSRTRDHSLR 101
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 24.6 bits (51), Expect = 9.1
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 352 SSSAGPSRKPSPQSPVSSRIHSTRFVGV**CSPAVPRATFS-TRTPYTARR 501
S++ PS KPS + P+S + S+ F + P + S +RTP + +R
Sbjct: 249 SNTDNPSTKPSNEMPISPLLSSSVFFKD--TEMSTPNSNHSRSRTPSSKKR 297
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 24.6 bits (51), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 264 YGYTETSVQTSEAIRLEDLADAVTETGELALPITLANI 151
YGYT S S + ++AD + ETG L +L I
Sbjct: 1070 YGYTSASF--SGRMPCSEIADTIVETGREILSYSLEYI 1105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,982,823
Number of Sequences: 5004
Number of extensions: 38607
Number of successful extensions: 179
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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