Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H14
(601 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.042
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 0.91
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 1.6
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 27 2.1
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 27 2.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 2.8
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 27 2.8
SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr 1... 26 4.8
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 6.4
SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 6.4
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.5
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 25 8.5
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 8.5
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 25 8.5
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 32.7 bits (71), Expect = 0.042
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = -2
Query: 429 SPCSLISQTRPALQCTFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFS 250
S S S + P+ + SS+ S S +S S S + + S+S + SS+ SA P S
Sbjct: 155 SSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSS 214
Query: 249 RCSDSEMSPRG-----SPADVGRSVVVVRKAPMAST 157
S S+ S +PA S +V A AST
Sbjct: 215 SKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTAST 250
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 28.3 bits (60), Expect = 0.91
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 169 RRLTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG 297
RR YD YG + G A+P G P GG PG PGG
Sbjct: 60 RRKLYDQYGITE-GNAAPPPPGAEGGPGAGFGGFPGAG--PGG 99
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 507 VSLKFVHTLRLESVSYGHSLMQLQIAS 427
VS +F H LRL+ V+ H + +IAS
Sbjct: 291 VSTRFSHELRLKPVAVAHGIKNSEIAS 317
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.1 bits (57), Expect = 2.1
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 203 TSAGLPRGDISESEHLEN-GMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCM 379
TS G IS E +N G+ E D E++ + E + P LDD +
Sbjct: 11 TSNGFSEEYISHPERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFLEELDDDHL 70
Query: 380 KVHCSAGRVCEINEHGEAICNCIKEC 457
+ G + +N GE + +++C
Sbjct: 71 HELVTNGGILYMNSLGEGVSGSVRKC 96
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 161 DAIGALRTTTTERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNE 331
D L+ T ++R + L S+ H G+ ES ++R+F A + +LN+
Sbjct: 659 DKENPLKLTDSQRQRISLLKMATYSKLHHAVEGVKESFEQRKFFNAADIMKNFLLND 715
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 194 ERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDP 373
ERP+ A + IS+ +HL E L E A+ S +++ AP+N +N+ P
Sbjct: 286 ERPSEANVV---ISQDQHLTEDEDEELKRAIAISLEEAQKSSQKDDNVTAPNN-MNISYP 341
Query: 374 CMKVH 388
+ H
Sbjct: 342 SVPAH 346
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 335 VTHSGSRRHELSQP-PGIVSRPGSPPCRSRGAPTRRCP 225
++ S S H SQ PG S P P + G ++CP
Sbjct: 66 ISSSSSEPHHTSQSTPGETSSPVCPVSGAHGGADKKCP 103
>SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 165
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +2
Query: 227 DISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRV 406
+I E E L+ F EAERA + I + + AP+ ++ L P G V
Sbjct: 3 NIRNIERSEVEEVSKLEAICFPEAERASFARIKDRVKRAPEIQLGLFAPTQHTSTLIGHV 62
Query: 407 CEINEHGEAI 436
E +
Sbjct: 63 LTSRTGSETV 72
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 389 CSAGRVCEINEHGEAICNCIKEC 457
C+A R+C++ E C+ +C
Sbjct: 974 CTASRICKVREIASLSLTCLLDC 996
>SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 359 NLDDPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 505
NL K++ G + + HG I CIK+ + + K T FNE
Sbjct: 105 NLHKGAAKIYSMGGVIAAVC-HGPVILPCIKDSTGFSIVKGKTVTAFNE 152
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -2
Query: 372 GSSRLISLSGASRDSFRISETRALSAS 292
G+ +L +SRD+FR ++T+A S+S
Sbjct: 47 GNKKLKESQFSSRDNFRTTQTQASSSS 73
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 300 SASWNRLSSRLSAMPFSRCSDSEMSPRGSP-ADVGRSVVVVRK 175
+AS ++++ L P+SR D + S G+P +D+ +VV +K
Sbjct: 79 TASAKKVTAVLPVFPYSRQPDQKFSFSGAPLSDLQDAVVPCKK 121
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 390 AAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTRPG 512
++P+ + STST S+ S + T+PT G Q + G
Sbjct: 464 SSPSGTNSSTSTSSTSSKHSTGISTEPTTGEENKQDGSVGG 504
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 590 GGTAPRGTAPSGRGRGSAVGTPRSPMTRS 504
GGT G PS GSA+ P++ R+
Sbjct: 409 GGTGYTGVTPSHAANGSALAAPQATPFRT 437
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,248,618
Number of Sequences: 5004
Number of extensions: 42510
Number of successful extensions: 145
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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