Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H14
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354... 32 0.31
04_04_1398 - 33245268-33245876,33247516-33247608,33247639-332478... 31 0.93
02_05_1137 - 34372803-34372869,34373088-34373229,34373334-343734... 30 1.2
01_05_0352 + 21271835-21271928,21272029-21272087,21272453-212726... 30 1.2
09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335... 30 1.6
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 30 1.6
07_01_0263 - 1960935-1961174,1961293-1961328 30 1.6
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 30 1.6
11_06_0324 - 22371523-22371567,22372147-22372488,22372577-22372594 29 2.2
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 29 2.2
05_03_0113 + 8526595-8527440,8527662-8528357 29 2.2
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 29 2.8
02_05_1178 + 34758306-34758411,34759449-34759627 29 2.8
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 29 3.8
12_02_0989 - 25069052-25070134 28 5.0
10_06_0132 + 11073057-11073345,11073899-11073903,11074358-110744... 28 5.0
07_03_0074 + 13068874-13069524 28 5.0
04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163 28 5.0
03_06_0742 + 35900505-35900519,35901230-35901281,35901647-359017... 28 5.0
02_04_0335 + 22117902-22119869 28 5.0
01_05_0739 + 24807181-24809121 28 5.0
08_01_0116 - 934801-934949,935745-935854,935930-936055,936439-93... 28 6.6
02_04_0452 + 23044190-23045227 28 6.6
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 28 6.6
08_02_1289 - 25923916-25924586,25925148-25926630 24 7.2
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 27 8.7
01_01_0452 - 3357687-3358332,3358779-3359641 27 8.7
>03_05_0875 -
28434894-28435082,28435173-28435247,28435399-28435490,
28435721-28435835,28436019-28436188,28436237-28436310,
28436397-28436553,28436658-28436730,28436898-28436960,
28437067-28437341,28437710-28437816,28437884-28438788,
28439742-28440032
Length = 861
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 160 RRHRRLTYDDYGAADVGGASPRGHLRVGAPRERHGGEP 273
R+HRR +DD A D G +SP+ H R G R RH P
Sbjct: 14 RKHRRSPHDDDDAED-GASSPKRHKR-GHHRHRHRVSP 49
>04_04_1398 -
33245268-33245876,33247516-33247608,33247639-33247827,
33248146-33248496
Length = 413
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -3
Query: 323 GSRRHELSQP-PGIVS--RPGSPPCRSRGAPTRR 231
GS++ +L++ PGI+ RP SPP SRG+ RR
Sbjct: 5 GSKKRKLAEEDPGIIGAGRPPSPPSGSRGSADRR 38
>02_05_1137 -
34372803-34372869,34373088-34373229,34373334-34373403,
34373521-34373823,34374215-34374280,34374425-34374490,
34374584-34374682,34376153-34376310,34376951-34377039,
34377209-34377591
Length = 480
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 173 ALRTTTTERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDN 352
AL ++ +E+PT PRG S + + N ++E R E +A S I N S+ D
Sbjct: 212 ALGSSESEQPTRPARPRGKRSRAAEVHN-LSEKRRRSRINEKMKALQSLIPNSSK--TDK 268
Query: 353 EINLDD 370
LDD
Sbjct: 269 ASMLDD 274
>01_05_0352 +
21271835-21271928,21272029-21272087,21272453-21272641,
21273568-21273738,21274542-21274694
Length = 221
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 188 TTERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRD 340
T +R T+ +G S E LE+GMAE+L Q++ R++E N++ D
Sbjct: 87 TLKRVTTGNAQQG--SREELLESGMAETLGVSADQKSRLLRITEKQNKTTD 135
>09_04_0330 +
16731390-16731699,16731774-16732080,16732182-16733561,
16734064-16734112
Length = 681
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 353 EINLDDPCMKVHCSAGRVCEINEHGEAICNCIKEC-PYETDSRRKVCTNFNETW 511
+IN +D K +A VCE + GE + +C C + D R C + E W
Sbjct: 593 QINGEDHERKEEAAAAAVCEGSGGGERVVDC--ACGAVDDDGERMACCDICEAW 644
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 365 DDPCMKVHCSAGRVCEINEHGEAICNCIKE 454
DD C K+ GRV E N+ E IC+ I E
Sbjct: 212 DDFCPKIEIDGGRVYEQNKCWEDICHAIAE 241
>07_01_0263 - 1960935-1961174,1961293-1961328
Length = 91
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 593 RGGTAPRGTAPSGRGRGS 540
RG T+P+ TAP G GRGS
Sbjct: 16 RGTTSPKTTAPPGNGRGS 33
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 151 KHRR-RHRRLTY---DDY-GAADVGGASPRGHLRVGAPRERHGGEPGR 279
+HRR RH R Y DDY G G S R R RHGG P R
Sbjct: 182 RHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGRRRHGGSPPR 229
>11_06_0324 - 22371523-22371567,22372147-22372488,22372577-22372594
Length = 134
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 151 KHRRRHRRLTYDDYGAADVGGASPRGHLRVGAPRER 258
+ RRRHR + G AD+ P H R AP+ER
Sbjct: 89 RRRRRHRHRRHSSDGGADL--RRPLRHDRAAAPKER 122
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 170 GALRTTTTERPTSAGLPRGDISE-SEHLENGMAESLD---ERRFQEAER 304
G + TTT P SA RG++ + + HL MA+ +D E +F AE+
Sbjct: 300 GRTQLTTTTVPNSAFFRRGEVGDWANHLSPEMAQRIDAITEAKFAGAEQ 348
>05_03_0113 + 8526595-8527440,8527662-8528357
Length = 513
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 211 GASPRGHLRVGAPRERHGGEPGRETIPGG 297
G PRG GA R GG PGR GG
Sbjct: 71 GIRPRGSRSFGARRGGFGGRPGRSGFGGG 99
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 194 ERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRD 340
ERP+ AG GD+ E EH NG A R +E + + N +RD
Sbjct: 206 ERPSVAG---GDLIEEEHYGNGEASVAGGDRIEEHCGNVEASVANSNRD 251
>02_05_1178 + 34758306-34758411,34759449-34759627
Length = 94
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 341 HRVTHSGSRRHELSQPPGIVSRPGSPPCRSR 249
HRVT +GS RHE S+ + S P PP S+
Sbjct: 61 HRVTQAGSSRHEPSKRLALPSSP--PPLESQ 89
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -3
Query: 593 RGGTAPRGTAPS--GRGRGSAVGTPR-SPMTRSR 501
+GG RG PS GRGRG+ TP P R R
Sbjct: 458 KGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGR 491
>12_02_0989 - 25069052-25070134
Length = 360
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 593 RGGTAPRG-TAPSGRGRGSAVGTPRSPMTRSR*SLCTPCA*SRFRMDTP 450
RGGT P G TAP G S P S + +R + A SR R P
Sbjct: 301 RGGTGPGGATAPGGGFFMSLASEPPSILAAARRASAAAAASSRLRCGDP 349
>10_06_0132 +
11073057-11073345,11073899-11073903,11074358-11074404,
11074843-11074967,11078036-11078592
Length = 340
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 372 GSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMP 256
G S +SLS A + ++E R L A +R SSR SA P
Sbjct: 11 GLSHSLSLSRADLAAVVVAEPRLLYAKADRESSRFSARP 49
>07_03_0074 + 13068874-13069524
Length = 216
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 142 EVQKHRRRHRRLTYDDYGAADVGGASPRGHLRVGAPRERHGGE 270
E + RRR R+ VGGA PRG R GA GGE
Sbjct: 106 EGEVERRRAARIWGCRRRGEVVGGADPRGRRRGGAAEGWGGGE 148
>04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163
Length = 723
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -3
Query: 413 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 234
+H GRRC L CT + ++ + H G RR E P +R S C G +
Sbjct: 374 AHGGGRRCEELGCTKSAE--GKTDYCIAHGGGRRCEHDGCPK-AARGKSGRCIKHGG-GK 429
Query: 233 RC 228
RC
Sbjct: 430 RC 431
>03_06_0742 +
35900505-35900519,35901230-35901281,35901647-35901772,
35902303-35902613,35902745-35902988,35903726-35903976,
35904071-35904277,35904546-35904713,35904798-35905127,
35905266-35905400
Length = 612
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 463 VWTLLDAVADSFPVLVDLTDTAGAAVHFHARIVKIDFIVRSI 338
VW + FP L +D A A+ F + VK+D+ +S+
Sbjct: 169 VWVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSV 210
>02_04_0335 + 22117902-22119869
Length = 655
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 413 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRR 312
+H GRRC L CT + +H + H G RR
Sbjct: 307 AHGGGRRCMQLGCTKSAE--GKTDHCIAHGGGRR 338
>01_05_0739 + 24807181-24809121
Length = 646
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 413 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRR 312
+H GRRC L CT + +H + H G RR
Sbjct: 306 AHGGGRRCQFLGCTKSAE--GRTDHCIAHGGGRR 337
>08_01_0116 -
934801-934949,935745-935854,935930-936055,936439-936526,
936638-936758,936848-936926,937093-937156,937240-937445,
937676-937715,937748-938009
Length = 414
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 330 SFRISETRALSASWNRLSSRLSAMPFSRCSDSEMSPRGSPADVG 199
SF I+E RAL + + + RL+A + +SP S +D G
Sbjct: 94 SFPIAEPRALDRTISEIEMRLAAARTMQARSQGLSPSDSGSDQG 137
>02_04_0452 + 23044190-23045227
Length = 345
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 353 HCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPT 237
H H +HS SR H S P + P PP + A T
Sbjct: 178 HGHAHSHSHSHSRAHNPSTRPPTSAPPPPPPAAASSATT 216
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = -2
Query: 369 SSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDSEMSPRGSPADVGRSV 190
+S + GAS DS+ + W+RL RLSA + + S + G S
Sbjct: 54 ASASAAAGGASSDSYSSGSCHSPFPEWSRLVDRLSAAGYGARAPSPADELDLDPECGLS- 112
Query: 189 VVVRKAPMASTMFLDLGVDRAD 124
A A + FL DR D
Sbjct: 113 ---SDAEAAVSSFLAFARDRPD 131
>08_02_1289 - 25923916-25924586,25925148-25926630
Length = 717
Score = 23.8 bits (49), Expect(2) = 7.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 393 APAVSVRSTSTGKLSATASRSVHTKPTLGA 482
+P + +T+TG + A TKPT G+
Sbjct: 263 SPTAAAETTTTGTVPAEEGTQGATKPTKGS 292
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 462 TKPTLGARCAQTSTRPGH 515
TKPTL + A +T+P H
Sbjct: 332 TKPTLPSAPASPATKPTH 349
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 347 QEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 234
+EHR+T ++H+ QPP R G P R +R
Sbjct: 120 KEHRITFR-EQQHQPPQPPPYHQRSGGPSSRGGSGESR 156
>01_01_0452 - 3357687-3358332,3358779-3359641
Length = 502
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 233 SESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRVCE 412
S+ HL++ +SLDE+ E V +L R P+ +++ P ++H + V
Sbjct: 77 SKPVHLKSYTQQSLDEQEMLELFVDIVDWVL---RSGPNKKLSFQFPRAQIHGNLKDVFN 133
Query: 413 INEHGEAICNCIKECPY 463
I A CI E P+
Sbjct: 134 IVFLSLAFLVCIYEAPH 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,941,877
Number of Sequences: 37544
Number of extensions: 375000
Number of successful extensions: 1853
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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