Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H14
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              49   3e-08
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   9.2  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 49.2 bits (112), Expect = 3e-08
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 368 DPCMKVHCSAGRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 544
           DPC   +C  G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -3

Query: 557 GRG---RGSAVGTPRSPMTRSR*SL 492
           GRG    GS  G+PRSP + SR S+
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSRCSV 334


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 167  IGALRTTTTERPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAP 346
            IG L     +R       R  I E E L NG+   L  +R + ++ A  + +   +  + 
Sbjct: 806  IGILWNMNNKRLDPKSDSRYTIRE-EILANGVLSDLSIKRTERSDSALFTCVATNAFGSD 864

Query: 347  DNEINL 364
            D  IN+
Sbjct: 865  DTSINM 870


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 223 RGHLRVGAPRERHGGEPGRETI 288
           +G    G P +R+GGE  ++ +
Sbjct: 532 KGAAAAGQPSKRNGGETNKQEL 553


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength
          rhodopsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = +3

Query: 21 ECRWQEFLPKNPTW 62
          +  W ++ P NP W
Sbjct: 38 DANWYQYPPLNPMW 51


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
          rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = +3

Query: 21 ECRWQEFLPKNPTW 62
          +  W ++ P NP W
Sbjct: 4  DANWYQYPPLNPMW 17


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 221 RGDISESEHLENGMAESLDERRFQEAERA 307
           R D  E+E  E+G  +S  E+R +  E A
Sbjct: 280 RDDDEENEEEEDGRGQSEAEKRLKLDEDA 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,365
Number of Sequences: 438
Number of extensions: 3260
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)