Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H13
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.25 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            28   0.25 
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   5.4  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    24   5.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 590 WHKFDTPFMKSSWE-PSTWFSLSRTF 664
           W  +D+P +  SW+  STW  L+ T+
Sbjct: 168 WQLYDSPTLPESWKFNSTWLGLATTY 193


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 590 WHKFDTPFMKSSWE-PSTWFSLSRTF 664
           W  +D+P +  SW+  STW  L+ T+
Sbjct: 168 WQLYDSPTLPESWKFNSTWLGLATTY 193


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 643 PSAGFPRGLHEGRIELVPAGSEVKRRGWSL 554
           PS+ + R +   R   VPAGSEV   GW +
Sbjct: 147 PSSAYIRPIAL-RTSSVPAGSEVVISGWGV 175


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 495 AALADAPILSLNIYSRPPPT 436
           A LA   IL +  Y+ PPPT
Sbjct: 14  AWLASVTILGVEAYATPPPT 33


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 402 CPPFPIYHQPTLLVVVSNICSRTRSVHQRAP 494
           C  F +     L VVV N   RT  +H+  P
Sbjct: 300 CIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 402 CPPFPIYHQPTLLVVVSNICSRTRSVHQRAP 494
           C  F +     L VVV N   RT  +H+  P
Sbjct: 300 CIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -1

Query: 260 RKLIQLYGPQFNLVSEINGAKSTEL---VIFVSSIGTL 156
           R  +Q + P+FN ++ +NG   + +   + FV  I  L
Sbjct: 17  RTEVQGFDPEFNAITGLNGTGKSNILDSICFVLGISNL 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,652
Number of Sequences: 2352
Number of extensions: 16535
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)