Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H11
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   1.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.8  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 226 IEGSIGWSPLVGAGEMSLPLYNL 158
           IEG +   P+ GAG+ ++ +Y+L
Sbjct: 133 IEGKVLLLPVRGAGKSNITMYDL 155


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 255 RRYTRSIHSHREKRSLSRNYYTSFPIH 335
           RRY  +      +R  S  YY+++ +H
Sbjct: 415 RRYQPAFRCKPSQRFASGRYYSAYSLH 441


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 245 GPQQKVHSQYSFASRKKKFIEKL 313
           GP+   H+     ++ K+FI+ L
Sbjct: 78  GPETSRHTTLGLLTKAKRFIKSL 100


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56  GREFLSALHTTNIQTSSDEAHQ 121
           G+E+ +A   T+I  S   AHQ
Sbjct: 786 GKEYYAASFHTDIGNSQSLAHQ 807


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,970
Number of Sequences: 438
Number of extensions: 3094
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)