Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H10
(484 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95... 179 1e-45
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95... 173 5e-44
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 157 3e-39
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 144 4e-35
11_06_0295 + 22033367-22034947,22035030-22035137,22035230-220353... 29 1.5
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 29 2.0
04_04_1209 + 31755637-31755821,31756017-31756165,31756703-317568... 29 2.0
10_08_0335 + 16884997-16885054,16885677-16885834 29 2.6
09_02_0303 + 7112456-7113244,7113328-7113488,7114523-7114583,711... 28 4.5
07_03_0876 - 22215688-22215789,22216051-22216206,22217227-222172... 28 4.5
07_01_0307 - 2194796-2199274 27 6.0
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 27 7.9
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 27 7.9
04_04_0725 - 27581658-27581663,27582379-27582481,27582697-275830... 27 7.9
>08_01_0119 -
951492-951679,951780-951918,952023-952095,952196-952218
Length = 140
Score = 179 bits (435), Expect = 1e-45
Identities = 84/115 (73%), Positives = 95/115 (82%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
+K A D++E I K KKG PSQIGV+LRD HG+ V+ VTG KILRI+KA GLAP++P
Sbjct: 26 VKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 448
EDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WK
Sbjct: 86 EDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVET 111
MGRMH G+GIS +A+ Y+R+ P+WV+T
Sbjct: 1 MGRMHSRGKGISSSAIPYKRTPPSWVKT 28
>08_01_0120 -
957365-957552,957642-957780,957847-957970,958398-958486
Length = 179
Score = 173 bits (422), Expect = 5e-44
Identities = 81/108 (75%), Positives = 91/108 (84%)
Frame = +2
Query: 125 IKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLI 304
++E I K KKG PSQIGV+LRD HG+ V+ VTG KILRI+KA GLAP++PEDLY+LI
Sbjct: 72 VEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLI 131
Query: 305 KKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 448
KKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WK
Sbjct: 132 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 179
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +1
Query: 52 RGISQAALAYRRSVPTWVET 111
+GIS +AL Y+R+ P+W++T
Sbjct: 31 KGISSSALPYKRTPPSWLKT 50
>07_03_0978 +
23099690-23100108,23100530-23100564,23100868-23100926,
23101269-23101310,23102003-23102065,23102172-23102253,
23102570-23102609,23102657-23102753
Length = 278
Score = 157 bits (382), Expect = 3e-39
Identities = 72/115 (62%), Positives = 93/115 (80%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
+K +A +++E I ++ KKG PSQIG +LRD+H V + VTG KILR++K+ GLAP++P
Sbjct: 26 VKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILRVLKSRGLAPEVP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 448
EDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+ +P +K
Sbjct: 86 EDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAKKIPAFFK 140
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVETN 114
MGRMH G+G+S + L YRR+ P WV+T+
Sbjct: 1 MGRMHSSGKGMSCSVLPYRRAAPAWVKTS 29
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 144 bits (348), Expect = 4e-35
Identities = 69/106 (65%), Positives = 80/106 (75%)
Frame = +2
Query: 122 DIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYL 301
+++E I K K G SQIGV+LR HG+ V+ + KIL I+KA GLAP + EDLY+L
Sbjct: 89 EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKILHILKAHGLAPKILEDLYFL 148
Query: 302 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPP 439
IKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK LPP
Sbjct: 149 IKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTKKLPP 194
>11_06_0295 +
22033367-22034947,22035030-22035137,22035230-22035370,
22035576-22035625,22036100-22036168,22036649-22036781,
22037634-22037747,22037826-22038038,22038387-22038500,
22038768-22038900,22039304-22039416,22040204-22040284,
22040397-22040483
Length = 978
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -1
Query: 346 PITFQMFPHGDSLLDQVVQIFR*IRSKTHSFHDTQDLFTSNKSDLCNTMRVPEHDTDLGR 167
P +FQ+ +G D IF H H+T TS K++LC T+ V L
Sbjct: 749 PASFQLRHNGSCFSDIFYDIFSAWEKNDH--HETYYSLTSLKNNLCQTVNVRNIFEKLRA 806
Query: 166 SKTLFAKFEDLFLN 125
K + DL L+
Sbjct: 807 GKYFASVILDLVLD 820
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 294 YKSSGRSGARPIAFMIRRIFLPVTNLTCA 208
Y GR G RP+A M+ R V N TCA
Sbjct: 400 YNVPGRDGYRPVARMLARHDGAVLNFTCA 428
>04_04_1209 +
31755637-31755821,31756017-31756165,31756703-31756845,
31756902-31757024
Length = 199
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +2
Query: 236 KILRIMKAMGL-APD--LPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE----SRI 394
KI R+++A+ A D LP +L ++ AV MR R+RK+KD++ ++++E R
Sbjct: 105 KITRVLRAVHTGAHDRRLPGNLDKTVRVAV-MRPKTSRSRKEKDAEEEVLVIEGIERERE 163
Query: 395 HRLARY 412
HR Y
Sbjct: 164 HRGGEY 169
>10_08_0335 + 16884997-16885054,16885677-16885834
Length = 71
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 17 SRQVWVVCTDLAGVYPRRRWRTDAVSLPGLKL 112
+R VW++ DLAG P++R D P L L
Sbjct: 11 ARGVWLMAADLAGDRPQKRGEEDPRRKPSLAL 42
>09_02_0303 +
7112456-7113244,7113328-7113488,7114523-7114583,
7114665-7114733,7114862-7114947,7115399-7115456,
7115631-7115843,7116059-7116124,7116368-7116484,
7116595-7116657
Length = 560
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 37 MHGPGRGISQAALAYRRSVPTWVE 108
+HGP RG+ ++ L RR +P W E
Sbjct: 42 LHGP-RGVGKSTLLLRRLLPQWSE 64
>07_03_0876 -
22215688-22215789,22216051-22216206,22217227-22217247,
22217311-22217580,22217793-22219178,22220562-22220621
Length = 664
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 177 IWEGVRPFLPSLKICSLISSAVSFNPGRDTASVRQRR 67
IWEGV + ++ + L A + +P DT SV RR
Sbjct: 216 IWEGVTLLIRAVHLAILFFPATALSPFADTFSVGFRR 252
>07_01_0307 - 2194796-2199274
Length = 1492
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 180 PIWEGVRPFLPSLKICSLISSAVSFNPGRDTASVRQR 70
P+ E L SLK SL SS+++FNP + + V R
Sbjct: 1070 PLEERHLQMLTSLKRFSLFSSSIAFNPTVERSDVEWR 1106
>12_01_0151 -
1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 319 GDSLLDQVVQIFR*IRSKTHSFHDTQDLFTSNKSDLCNTMRVPEHDTDLGRSKTLFAKF 143
GD L V++ + + T + QDL KS L + +HDTD R K K+
Sbjct: 40 GDKLAPLVIREYSSLMGVTKDLQELQDLVEEIKSGL----QSEKHDTDNDRDKYAVLKY 94
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 275 DLPEDLYYLIKK-AVAMRKHLERNRKDKDSKFRL 373
DLPE L++ AVA R LE++R D+ FR+
Sbjct: 24 DLPEQQPQLMENVAVAKRSRLEQHRTLSDNSFRV 57
>04_04_0725 -
27581658-27581663,27582379-27582481,27582697-27583025,
27583263-27583365,27583490-27583671,27584135-27584324,
27584570-27584665,27584960-27585054,27585396-27585590
Length = 432
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 65 RRRWRTDAVSLPGLKLTADDIKEQIFKLGKKGLTPSQIGVMLR 193
R+RW T LP +L+A+D + + GK LTP +IG+MLR
Sbjct: 280 RKRWDT----LP--ELSAEDERSR----GKCPLTPQEIGLMLR 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,510
Number of Sequences: 37544
Number of extensions: 303119
Number of successful extensions: 869
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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