Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H10
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 237 1e-62
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 237 1e-62
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 237 1e-62
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 237 1e-62
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 237 1e-62
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 237 1e-62
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 237 1e-62
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 237 1e-62
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 186 5e-47
BC063562-1|AAH63562.1| 337|Homo sapiens sideroflexin 4 protein. 29 8.6
AY269785-1|AAP97074.1| 305|Homo sapiens sideroflexin protein. 29 8.6
AL355861-1|CAI15801.1| 337|Homo sapiens sideroflexin 4 protein. 29 8.6
AL355598-1|CAI14126.1| 337|Homo sapiens sideroflexin 4 protein. 29 8.6
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 237 bits (581), Expect = 1e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAPDLP
Sbjct: 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESST 463
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESST
Sbjct: 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query: 464 ASALVA 481
ASALVA
Sbjct: 146 ASALVA 151
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 28 MGRMHGPGRGISQAALAYRRSVPTWVE 108
MGRMH PG+G+SQ+AL YRRSVPTW++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLK 27
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 186 bits (452), Expect = 5e-47
Identities = 88/102 (86%), Positives = 98/102 (96%)
Frame = +2
Query: 104 LKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLP 283
LKLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLA DLP
Sbjct: 15 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLASDLP 74
Query: 284 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 409
EDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 75 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 61 SQAALAYRRSVPTWVE 108
SQ+AL YRRSVPTW++
Sbjct: 1 SQSALPYRRSVPTWLK 16
>BC063562-1|AAH63562.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 252 MIRRIFLPVTNLTCATP*ESLSMTPIWEGVRP-FLPSLKICSLISSAVSFNPGR 94
+I ++F P L P LSMTP+ +G++ LP + +C+ +++ S N R
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSINGNR 155
>AY269785-1|AAP97074.1| 305|Homo sapiens sideroflexin protein.
Length = 305
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 252 MIRRIFLPVTNLTCATP*ESLSMTPIWEGVRP-FLPSLKICSLISSAVSFNPGR 94
+I ++F P L P LSMTP+ +G++ LP + +C+ +++ S N R
Sbjct: 94 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSINGNR 146
>AL355861-1|CAI15801.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 252 MIRRIFLPVTNLTCATP*ESLSMTPIWEGVRP-FLPSLKICSLISSAVSFNPGR 94
+I ++F P L P LSMTP+ +G++ LP + +C+ +++ S N R
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSINGNR 155
>AL355598-1|CAI14126.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 252 MIRRIFLPVTNLTCATP*ESLSMTPIWEGVRP-FLPSLKICSLISSAVSFNPGR 94
+I ++F P L P LSMTP+ +G++ LP + +C+ +++ S N R
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSINGNR 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,079,266
Number of Sequences: 237096
Number of extensions: 1718381
Number of successful extensions: 7467
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7467
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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