Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H10
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   4.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   5.2  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    21   5.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   5.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 22  ASMGRMHGPGRGISQAALAYRRSV 93
           A  G   GPG   + A L+ RRSV
Sbjct: 150 APTGSSCGPGAAAAAALLSKRRSV 173


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 63  GYTPARSVHTTH 28
           GYTP    HT H
Sbjct: 356 GYTPVLDCHTAH 367


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 63  GYTPARSVHTTH 28
           GYTP    HT H
Sbjct: 67  GYTPVLDCHTAH 78


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 63  GYTPARSVHTTH 28
           GYTP    HT H
Sbjct: 356 GYTPVLDCHTAH 367


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 290 LYYLIKKAVAMRKHLERNRKD 352
           LYY + K +  R  LER   D
Sbjct: 260 LYYFLHKQLMTRYFLERMSND 280


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 290 LYYLIKKAVAMRKHLERNRKD 352
           LYY + K +  R  LER   D
Sbjct: 260 LYYFLHKQLMTRYFLERMSND 280


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 235 FTSNKSDLCNTMRVPEHDTDLGRSKTL 155
           F + KS    TM +P H   L + KT+
Sbjct: 125 FKNAKSVTFQTMTIPNHYLWLYKDKTI 151


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 47  LAGVYPRRRWRTDAVS 94
           LAGV  +R+W+ D  S
Sbjct: 375 LAGVLGQRQWQFDVYS 390



 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 335 ERNRKDKDSKFRLILVESRIHRLARYYKTKSV 430
           +R RK+ DSK   + ++   H L  ++K   V
Sbjct: 492 QRLRKELDSKTGGVNLKGHAHWLTLHFKDPKV 523


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 153 LPSLKICSLISSAVSF 106
           +PS K+ ++ISS  SF
Sbjct: 822 VPSTKVLAMISSVKSF 837


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,287
Number of Sequences: 438
Number of extensions: 3460
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)