Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H09
(532 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.11
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 27 2.3
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 3.0
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 5.3
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 25 5.3
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe... 25 5.3
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 25 5.3
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 25 5.3
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.0
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 7.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 9.3
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.3
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = -1
Query: 364 RSQEDLDNGISGNIGLNVDGNTERLVVESWLTNLEVVWVTSLNLFFGQEYTVSGIKLAIV 185
R QED + G N+ G E + E ++ L F G+ + +S + I+
Sbjct: 1109 RCQEDFERGWKANLPSGKAGEAEIMSDEYYVAAAIKRRGLGLVRFIGELFKLSMLSEKIM 1168
Query: 184 KECD*FLNDNIIDFNADEMKFLLRIRLQV 98
EC L N+ D +E++ L R+ + V
Sbjct: 1169 HECIKRLLGNVTDPEEEEIESLCRLLMTV 1197
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 38 DPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 187
+P F Q Y IVG I + K + + +P+ K + I + V+E VT+ D
Sbjct: 6 EPEFQQAYKEIVGSIESSKLF-EVHPELKRVLPIISIPERVLEFRVTWED 54
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 344 IKIFLGPKYNDNGFPITLEENWHKFYELDWFTHKIT 451
+ I L P ND + T WHKF++ WF +T
Sbjct: 416 LHIELAPAANDIQWHNTYIGRWHKFFQ-GWFITLVT 450
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 319 LNVDGNTERLVVESWLTNLEVVWVTSLNLFFGQEYTVSGI---KLAIVKEC 176
LN+ TE ++ ++ +V V S N FFG + G+ K ++ ++C
Sbjct: 309 LNITRKTETILKSLKESSTPLVQVVSFNAFFGVMIAILGVQFFKASLNRQC 359
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 5.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 411 CQFSSNVMGNPLSLYLGPKKILITASVAISDLTSMV-TLKGLWLSRG 274
CQF V+G L+ K LI+ S A L+++ + KG LS G
Sbjct: 113 CQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMG 159
>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 363 LSTTIMDSPSHWKKTGINSTNWIG 434
LS + S+W++T ++ TNW+G
Sbjct: 208 LSVKAIIFASYWQQTVLSITNWLG 231
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 5.3
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 6/139 (4%)
Frame = +2
Query: 56 LYNRIVGYINAFKHYLKP----YPQEKLHFVGVKINDVVVEKL--VTFFDYSQFDATNSV 217
+Y +++G +N F+ ++ Y + + VKI+ +VV+KL +T + +
Sbjct: 385 VYYKLIGILNRFRKSVQRQEENYVNTRSTILSVKIHHIVVQKLNVITVLNNYGIHNEERL 444
Query: 218 FLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVKSDIATDAVIKIFLGPKYNDNGFPITL 397
+ K + S F F + + K + TD +K+ + NGFPI L
Sbjct: 445 SIVFKPLGASPKDTF-----------FDIINNQKYVVNTDGTLKVVI-----TNGFPIVL 488
Query: 398 EENWHKFYELDWFTHKITP 454
L FT + P
Sbjct: 489 YPTSKIETSLPQFTATLLP 507
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 5.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 EKLVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTID-VKSDIATD 337
E++V + QF+A + T+K + + P K R+ RL F +D + D ATD
Sbjct: 591 ERVVLLEAWKQFEAMHGTEDTRKHVSSLMPQVVKKRR-RLEDGSFEEYLDYLFPDTATD 648
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 25.0 bits (52), Expect = 7.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 230 KEIKTSYPHNFKVRQPRLNHKPFSVTIDVKSDIATDAVIKIFLGPKYNDNGFPI 391
+ I+ SYP+ F R P+ H P + +D + A + V L P+ N P+
Sbjct: 606 QHIQYSYPNTFVNRFPQNIHHPSANLLDASA--ALNPVQNPLLMPQQNHEHSPL 657
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 45 HSISYITGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SH 179
+S S I W T HSS+ +L R + S + ++ LRN H
Sbjct: 973 NSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRH 1017
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 416 FYELDWFTHKITPGQNKIVRNS 481
F LDWFT+ + QN+++R S
Sbjct: 654 FPTLDWFTNDSSVIQNELLRRS 675
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 338 AVIKIFLGPKYNDNGFPIT 394
A+ K+ L KYN N FP T
Sbjct: 663 AISKVSLNMKYNSNYFPTT 681
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,125,909
Number of Sequences: 5004
Number of extensions: 42641
Number of successful extensions: 121
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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