Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H08
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 339 YPTLKIFRKGELSSDYNGPRESNGIVKY 422
           Y   K++  GEL+S + GP+  + ++ +
Sbjct: 406 YEEYKMYELGELASSFVGPKVKDCLISW 433


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 406 MALSSTCVPKLDPALEIYLLWLTLKHSP 489
           ++++  C  +L+P L IY L + + H P
Sbjct: 110 LSVAVYCRDRLNPNLFIYALSVAILHRP 137


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 148 DEKSESVRSNTSSSAAEHKYTNPSKN 71
           D    S RS+TSS+  +++Y N + N
Sbjct: 96  DATGLSNRSSTSSNDPKNQYKNQNNN 121


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/18 (27%), Positives = 14/18 (77%)
 Frame = +2

Query: 44  NYVGVTEIFIFTRISIFM 97
           NY G++++F+F  ++ ++
Sbjct: 112 NYTGISDLFVFDDLNDYI 129


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 148 DEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSR 35
           +EK+   R + S    +  Y N  + +++ +T   +SR
Sbjct: 31  EEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 148 DEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSR 35
           +EK+   R + S    +  Y N  + +++ +T   +SR
Sbjct: 31  EEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 148 DEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSR 35
           +EK+   R + S    +  Y N  + +++ +T   +SR
Sbjct: 31  EEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 148 DEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSR 35
           +EK+   R + S    +  Y N  + +++ +T   +SR
Sbjct: 31  EEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,389
Number of Sequences: 438
Number of extensions: 2360
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)