Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H04
(390 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron d... 65 7e-11
AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron d... 65 7e-11
AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein. 65 7e-11
AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor p... 65 7e-11
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 39 0.007
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 39 0.007
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 39 0.007
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 39 0.007
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 39 0.007
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 39 0.007
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 39 0.007
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 39 0.007
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 39 0.007
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 39 0.007
BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein pr... 32 0.76
BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing... 32 0.76
BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. 32 0.76
BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing... 32 0.76
AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing... 32 0.76
AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing... 32 0.76
AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens ... 32 0.76
AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens ... 32 0.76
AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing... 32 0.76
BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 1.3
BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein. 31 1.3
AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type ... 31 1.3
AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 1.3
AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type ... 31 1.3
AK074961-1|BAC11317.1| 318|Homo sapiens protein ( Homo sapiens ... 31 1.3
AK027878-1|BAB55426.1| 531|Homo sapiens protein ( Homo sapiens ... 31 1.3
AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein. 31 1.3
AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open readi... 28 9.3
>BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 65.3 bits (152), Expect = 7e-11
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 LRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSND 180
L +YK QLQQVEAAL + +N VIELT+DL+ +Q +
Sbjct: 9 LASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSET----------- 57
Query: 181 DDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDG 354
L ++++ A + W VG+KC+A W DG YEA I+++ +N T + F G
Sbjct: 58 -------LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 110
Query: 355 YSSLEV 372
Y + EV
Sbjct: 111 YGNAEV 116
>AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 65.3 bits (152), Expect = 7e-11
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 LRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSND 180
L +YK QLQQVEAAL + +N VIELT+DL+ +Q +
Sbjct: 9 LASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSET----------- 57
Query: 181 DDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDG 354
L ++++ A + W VG+KC+A W DG YEA I+++ +N T + F G
Sbjct: 58 -------LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 110
Query: 355 YSSLEV 372
Y + EV
Sbjct: 111 YGNAEV 116
>AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein.
Length = 238
Score = 65.3 bits (152), Expect = 7e-11
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 LRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSND 180
L +YK QLQQVEAAL + +N VIELT+DL+ +Q +
Sbjct: 9 LASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSET----------- 57
Query: 181 DDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDG 354
L ++++ A + W VG+KC+A W DG YEA I+++ +N T + F G
Sbjct: 58 -------LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 110
Query: 355 YSSLEV 372
Y + EV
Sbjct: 111 YGNAEV 116
>AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor
protein.
Length = 238
Score = 65.3 bits (152), Expect = 7e-11
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 LRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSND 180
L +YK QLQQVEAAL + +N VIELT+DL+ +Q +
Sbjct: 9 LASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSET----------- 57
Query: 181 DDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDG 354
L ++++ A + W VG+KC+A W DG YEA I+++ +N T + F G
Sbjct: 58 -------LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 110
Query: 355 YSSLEV 372
Y + EV
Sbjct: 111 YGNAEV 116
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 90 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 140
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATID--DVTGDNLTVNFDGYSSLEVVSSEDV 390
+W VG+KC A W DG Y ATI D + V + GY + E + D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 600
>BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing 3
protein.
Length = 650
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 551 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 599
>BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein.
Length = 1179
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATIDDV-TGDNLTVNFDGYSSLEVVSSEDV 390
K +G+ C A + DG +Y A + ++ ++ V+F Y ++E V+++++
Sbjct: 762 KAEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADEL 811
>BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 600
>AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 600
>AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 600
>AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21082 fis, clone CAS02992. ).
Length = 713
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATIDDV-TGDNLTVNFDGYSSLEVVSSEDV 390
K +G+ C A + DG +Y A + ++ ++ V+F Y ++E V+++++
Sbjct: 293 KAEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADEL 342
>AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21007 fis, clone CAE03871. ).
Length = 651
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 238 YAK-WNVGEKCLAKWRADGMFYEATIDDVTGDNLT--VNFDGYSSLEVV 375
YAK W G++C A + D FY A ++ + +T V F Y + E V
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEV 600
>AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing
protein 1 protein.
Length = 777
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 244 KWNVGEKCLAKWRADGMFYEATIDDV-TGDNLTVNFDGYSSLEVVSSEDV 390
K +G+ C A + DG +Y A + ++ ++ V+F Y ++E V+++++
Sbjct: 359 KAEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADEL 408
>BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 502
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 531
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AK074961-1|BAC11317.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ90480 fis, clone NT2RP3002887. ).
Length = 318
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AK027878-1|BAB55426.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ14972 fis, clone THYRO1000715. ).
Length = 531
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 221 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 263
>AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 256 GEKCLAKWRADGMFYEATIDDVTGDNLTVNFDGYSSLEVVSSED 387
G CLAK + DG+++ A I DV TV FD E V D
Sbjct: 274 GSACLAKHQ-DGLWHAARITDVDNGYYTVKFDSLLLREAVVEGD 316
>AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 712
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 247 WNVGEKCLAKWRADGMFYEATIDDVTGD 330
W+ GE+CLA +G EA+I +T D
Sbjct: 29 WHPGERCLAPSPDNGKLCEASIKSITVD 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.129 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,212,937
Number of Sequences: 237096
Number of extensions: 877731
Number of successful extensions: 975
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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