Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H04
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    27   0.10 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.41 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           25   0.41 

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 26.6 bits (56), Expect = 0.10
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 319 HRQL*PHRTCHQLSI*QGTFHPHSIWHKTFPQRHFPRL 206
           H+Q+     C +L    G       WH+  P+ +FP+L
Sbjct: 238 HQQIMARYNCERLCNRLGRVKRFINWHEPIPEAYFPKL 275


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 319 VTGDNLTVNFDGYSSLEVVSSEDV 390
           V GDNL   FDG S + V +S+ V
Sbjct: 6   VVGDNLKDRFDGASRVMVSNSDRV 29


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 319 VTGDNLTVNFDGYSSLEVVSSEDV 390
           V GDNL   FDG S + V +S+ V
Sbjct: 7   VVGDNLKDRFDGASRVMVSNSDRV 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.129    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,367
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)