Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H03
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.0  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   4.5  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   4.5  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   4.5  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.5  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.0  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   7.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.9  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 262 RCGRSLEEIQFSP 224
           RCGRSLE   F+P
Sbjct: 109 RCGRSLEGYPFNP 121


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 262 RCGRSLEEIQFSP 224
           RCGRSLE   F+P
Sbjct: 125 RCGRSLEGYPFNP 137


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 52  QPRFQCQSIRH*KPAKYSSSSELQHCR 132
           QP F+C+  +     +Y S+  L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 151 HVVHSGTDSVEVRNLRNIWQVFSGE 77
           H  H     V+V NLR   +V +GE
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHTGE 63


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 101 YNNNYNTNYKKLQYYNIINIEQIP 124


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  HNDNHDFSAKAFATKNLPNIPQVP 115
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +3

Query: 72   KHSPLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTPMSLIVMTTLW 224
            K +P+  CQ       + +++      S + LV  RPP  P  +I   T++
Sbjct: 1167 KSAPIH-CQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVY 1216


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/45 (22%), Positives = 18/45 (40%)
 Frame = +2

Query: 35  NLFHNDNHDFSAKAFATKNLPNIPQVPNFNTVGAGVDYMFKDKIG 169
           +L  N+N DF      +   P++   P  ++   G      D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 318 HEDLMKGVSNFFQPALKSSDVVGV 247
           ++DL+   +   +P + +SDV+ V
Sbjct: 33  YDDLLSNYNKLVRPVVNTSDVLRV 56


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 318 HEDLMKGVSNFFQPALKSSDVVGV 247
           ++DL+   +   +P + +SDV+ V
Sbjct: 33  YDDLLSNYNKLVRPVVNTSDVLRV 56


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 102 IFGRFLVANALALKSWLSLW 43
           +F  +L +  + + SW+S W
Sbjct: 245 VFQTYLPSILIVMLSWVSFW 264


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 81   PLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTPMS 200
            PL++ +I        ++ P W      RLV L     P S
Sbjct: 888  PLRSLEILRLSGNRLVTFPVWQVTLNARLVELSLGSNPWS 927


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 288 SSIRLSLSPRGNPALVSRFP 347
           +S++L+  PR NP   S+ P
Sbjct: 46  ASLKLAFEPRRNPGPGSKGP 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,102
Number of Sequences: 438
Number of extensions: 2524
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)