Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_H02
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    36   0.010
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    31   0.29 
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    30   0.68 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    30   0.89 
AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical ...    30   0.89 
AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-relat...    30   0.89 
AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-relat...    29   1.2  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    29   1.2  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    29   1.2  
Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    27   4.8  
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    27   6.3  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 149 HDIALIRLMVTA-PYTDFVRPICLPSLDYTQQPPADFEMYVAGWG 280
           HDIA++ +      + ++ +PICLPS D+   P    +  V+GWG
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR--QCVVSGWG 158


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.5 bits (68), Expect = 0.29
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +2

Query: 149 HDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTVK 328
           +D A++R+      +   RPICLPSL   +         V GWG     I G+ LS+   
Sbjct: 144 YDFAIMRIHPPVNTSTTARPICLPSLPAVENRLC----VVTGWG---STIEGSSLSAPTL 196

Query: 329 PHVKLPYVDRDRCQA 373
             + +P +    C +
Sbjct: 197 REIHVPLLSTLFCSS 211


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 29  TNNGPDCMKGTKDCAHPVV-TAPIEKTIPHPDYIPNDVQGRHDIALIR 169
           T   P+ ++    C H V  + PI++   +P Y  +DV+  +DI  IR
Sbjct: 38  TRLSPNLLQNITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDIDNIR 85


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +2

Query: 35  NGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPIC 214
           N P C K   D  H  V A     +   ++  ++    HD A++ +     +++ VRPIC
Sbjct: 111 NDPRCKKS--DVIHNKVRA----VLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPIC 164

Query: 215 L--PSLDYTQQPPADFEMYVAGWG 280
           L  P++ YT+       + V GWG
Sbjct: 165 LPRPNMYYTK------SLAVPGWG 182


>AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical
           protein Y47H9C.6 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 263 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 168
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-related
           protein 3 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 263 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 168
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-related
           protein 2B protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 263 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 168
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 185 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 216


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 263 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 168
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 263 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 168
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical
           protein C41G6.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 208 GPYKICIRCCYHQPNKRNVMSALHIVGDVIWMWNSFF 98
           G Y I ++   H    RN M  LH VG  + ++ SFF
Sbjct: 40  GAYLIIVKTPSHMKCARNSMLCLHCVGAFVDLFFSFF 76


>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 25  YNKQWSGLHERYQRLCTSRCYCSYRKNYSTSRLHPQ 132
           Y K+   L + Y  +  + CY + RKNY T R+ P+
Sbjct: 294 YRKKEKKLDKIYNNVYNN-CYNNVRKNYCTKRITPK 328


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 37  WSGLHERYQRLCTSRCYCSYRKNYSTSRLHP 129
           W+ L E+ + L  +R  C +RKNYS +  +P
Sbjct: 409 WN-LTEKIENLFFNRKICDFRKNYSKNTKNP 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,514,509
Number of Sequences: 27780
Number of extensions: 297080
Number of successful extensions: 829
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)