Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_H01
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 152 9e-38
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 152 9e-38
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 152 9e-38
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 149 7e-37
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 145 8e-36
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 145 8e-36
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 145 8e-36
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 145 8e-36
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 145 8e-36
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 32 0.16
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 30 0.49
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 27 6.0
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 27 6.0
U53335-8|AAA96173.1| 606|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 26 7.9
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 26 7.9
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 26 7.9
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 152 bits (368), Expect = 9e-38
Identities = 75/112 (66%), Positives = 91/112 (81%), Gaps = 6/112 (5%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHL 117
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 152 bits (368), Expect = 9e-38
Identities = 75/112 (66%), Positives = 91/112 (81%), Gaps = 6/112 (5%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHL 117
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 152 bits (368), Expect = 9e-38
Identities = 75/112 (66%), Positives = 91/112 (81%), Gaps = 6/112 (5%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHL 117
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 149 bits (361), Expect = 7e-37
Identities = 74/112 (66%), Positives = 90/112 (80%), Gaps = 6/112 (5%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +V A+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHL 117
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 145 bits (352), Expect = 8e-36
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHL 117
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 145 bits (352), Expect = 8e-36
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHL 117
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 145 bits (352), Expect = 8e-36
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHL 117
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 145 bits (352), Expect = 8e-36
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHL 117
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 145 bits (352), Expect = 8e-36
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL 379
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHL 117
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -3
Query: 310 LTPWNSMGIPLREHSYLLSVYDEVSIYG-LNGTLETTVSRIILEKVDHVVK-TNERIIDS 137
L + + P L VY+ + Y ++ TLETT+ I + +D+V+K +++
Sbjct: 242 LFEFEKLNNPQNSFPLLYPVYETIQEYSKISETLETTILSGIQKNIDNVIKIAKSAKLNA 301
Query: 136 NNIGTLINR--STEHQATDATKTVNSDFRHD 50
++ L N S ++T A+K + F D
Sbjct: 302 ESVEQLSNMLLSRHSKSTKASKHITGFFNGD 332
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 179 LFQYDSTHGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 349
L+QY+ H R+K T+E + L+ G +A+F+ D + W G ++ + GVF
Sbjct: 496 LYQYNF-HERYK-TLETILYILIAAGPSVAIFTMNDRTGLEWMMTGG--MMYAVGVF 548
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 345 TPVDSTTYSAPA*PHGIA---WGSLSENTA---IFFPFTTRCPSTASTVPLKRP*VES 190
TPV +TT + PA P G+++ +T + P TT P+T +T P+ +P V S
Sbjct: 491 TPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPS 548
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -3
Query: 382 HQVSRSFISGCEHTG*FNNVFSTS---LTPWNSMGIPLREHSYLLSVYDEVSIYGLNGTL 212
H + S ++G EH FN S+ W+S R Y S+ DE+ + LNG
Sbjct: 1339 HSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSS-----RNVYYADSMNDEIGVASLNGKF 1393
Query: 211 ETTV 200
+ ++
Sbjct: 1394 KKSL 1397
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 159 PMKGSLIATTSAPLSIEARSTRRP-MRPKPLIPIFDMI 49
PM S T ++ S+E+ T+R R P+ P FD+I
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVI 206
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 159 PMKGSLIATTSAPLSIEARSTRRP-MRPKPLIPIFDMI 49
PM S T ++ S+E+ T+R R P+ P FD+I
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVI 206
>U53335-8|AAA96173.1| 606|Caenorhabditis elegans Hypothetical
protein C55C3.1 protein.
Length = 606
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 214 LETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDAT 80
L + R+IL V+H++ +N+ II + + R EH ++T
Sbjct: 67 LADQLPRLILPDVEHILPSNQGIIYISKVHLSRFRRAEHHQLNST 111
>Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical
protein T26H2.5 protein.
Length = 229
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 187 LEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVNSDFRHDYGKSIFS 29
LE V +++N S+ I ++ +T H A+ T+TV F + K + S
Sbjct: 13 LELVPPELRSNFENKSSSIIPLYLSSNTSHSASSYTRTVYVTFHKTFEKKVVS 65
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 289 GIPLREHSYLLSVYDEVSIYGLNGT 215
G+P EH+ L++ +D +SI G + T
Sbjct: 245 GLPRHEHAVLITKFDLISINGNSAT 269
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 26.2 bits (55), Expect = 7.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 384 PTK*AEALSVVVNTP-VDSTTYSAPA*PHGIAWGSLSENTAIFFPFTTRCPSTAS 223
PT + ALS +TP + ST SA P G+ S N+ P TT P TAS
Sbjct: 365 PTTTSAALSSTASTPSIASTATSAATNPPTTTAGA-STNSPATNPPTTSRPITAS 418
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 289 GIPLREHSYLLSVYDEVSIYGLNGT 215
G+P EH+ L++ +D +SI G + T
Sbjct: 245 GLPRHEHAVLITKFDLISINGNSAT 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,736,870
Number of Sequences: 27780
Number of extensions: 173635
Number of successful extensions: 619
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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