Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G21
(523 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0762 + 5699619-5699744,5699831-5699891,5699979-5700078,570... 31 0.42
12_01_0788 + 7192937-7192994,7193074-7193160,7193242-7193307,719... 30 1.3
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 29 1.7
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 29 2.3
11_06_0168 + 20868696-20870072 28 5.2
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 28 5.2
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 28 5.2
05_06_0211 + 26401495-26402224,26402932-26403014,26403295-264033... 28 5.2
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 6.9
03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,384... 27 6.9
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 27 9.1
03_06_0571 + 34804375-34804413,34804895-34804961,34806327-348065... 27 9.1
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 27 9.1
>06_01_0762 +
5699619-5699744,5699831-5699891,5699979-5700078,
5700436-5700560,5700631-5700706,5701122-5701164
Length = 176
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 108 LTYEEMLVRRN-DVYQHV--VNLHPGSLVPKF-TVTVHIKETANISELRVPEIRTGNEV 272
+ YE + RR+ D +H +HPG L F TV ++T N + RVP++ GN +
Sbjct: 102 MNYENCVQRRDKDQGEHKRGAEVHPGYLPQAFQTVEEWGEKTGNRNNTRVPDVMAGNRI 160
>12_01_0788 +
7192937-7192994,7193074-7193160,7193242-7193307,
7193447-7193555,7194522-7194785,7194919-7195006,
7195085-7195708,7196017-7196140,7196195-7196337,
7196434-7196649,7196781-7196873,7196952-7197032,
7197120-7197504,7197599-7197636
Length = 791
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 72 FNVEAASKVIFNLTYEEMLVRRNDVYQHVVNLHPGSLV--PKFTVTVHIKETANISELRV 245
F E ++ + T+E + R+DV ++ + PG V P+ + + +T ++S
Sbjct: 404 FQEEEGGDIVLDDTFEANTLSRDDVIPEILQMAPGQKVRPPRNSQPSNCPQTQHVSTSNS 463
Query: 246 PEIRTGNEVDATKDDAQMSNVIIQRE 323
++R N+ + ++ ++ RE
Sbjct: 464 KKVRGKNKSKVERRPIGENHELLSRE 489
>01_03_0050 +
11959421-11959736,11959892-11959960,11960641-11960979,
11961090-11961152,11962472-11962962,11963773-11964441
Length = 648
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 198 VTVHIKETANISELRVPEIRTGNEVDATKDDAQMSNVIIQREGTSA---VITFSPDLEEQ 368
+T + ETAN LRV + EV +T ++ N + E S V+ P E+
Sbjct: 458 LTEKVCETAN---LRVGSNSSPVEVTSTSAPFRVENASVSLEARSTPGQVVKQEPVFEKP 514
Query: 369 KRLMHVYAEKSKESATGENAGEGVSG 446
L HVY+ K + + VSG
Sbjct: 515 PALKHVYSGKRRRKLKMKEGSGPVSG 540
>11_06_0634 -
25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +3
Query: 144 VYQHVVNLHPGSLVPKFTVTVHIKETANISELRVPEIRTGNEVDATKDDAQMSNVIIQRE 323
++QH +N +VP VT+ A + LR+ E RTG + A +++V Q +
Sbjct: 172 IFQHPLNDKIPKMVPPSPVTLLEPPVAGVKRLRM-ENRTG-DTSAVAGTELLASVSDQLK 229
Query: 324 GTSAVITFSPDLEEQKRLMHVYAEKSKESATG 419
SA S E +RL+ A + + + G
Sbjct: 230 DLSAAPPASAG-ENNQRLVRPMASSASDKSKG 260
>11_06_0168 + 20868696-20870072
Length = 458
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 271 TSFPVLISGTRNSEIFAVSLICTVTVNL 188
T FP L+S T+N+ IF V + V +
Sbjct: 338 TGFPALVSNTQNTRIFRVDTVAKKLVQI 365
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +3
Query: 285 DDAQMSNVIIQREGTSAVITFSPDLEEQKRL-MHV--YAEKSKESATGENAGEGVSGQFV 455
D S++++ EG S D + + R +H Y E T EN + G +
Sbjct: 87 DGVDTSHILVAEEGNSPFTYIIVDNQTKTRTCIHTPGYPPMVPEELTQENLFAALDGADI 146
Query: 456 VQYDVDRPKDGQILVNDGYFV 518
V +DV + ++ + +FV
Sbjct: 147 VYFDVRLHETALLVAEEHFFV 167
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 377 DARICGEIERICYRGKCGRRCLRSICCTI 463
D ++C + E+ R +CG C RS C +
Sbjct: 268 DQKMCSDQEKCLRRSECGPYCPRSQCAPV 296
>05_06_0211 +
26401495-26402224,26402932-26403014,26403295-26403369,
26403442-26403513,26403684-26403764,26403946-26404043,
26404694-26404819,26404931-26404979,26405352-26405547,
26406475-26406491,26406786-26406839,26406845-26407036
Length = 590
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 387 YAEKSKESATGENAGEGVSGQFVVQYDVDRPKDGQILV 500
Y E+ +E +AG G G+ VV YD PK G + V
Sbjct: 127 YVEEDEEDKGEGSAGAGAGGRGVVYYD---PKPGDLAV 161
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 170 M*INHVLVNIITADQHFFVCQIEYYFRSGFNIES 69
M I+ VN I QHF + +Y+ S FN +S
Sbjct: 742 MSIHTAYVNAIRGAQHFIYIENQYFIGSSFNWDS 775
>03_01_0510 +
3841630-3844089,3844235-3844358,3844641-3844786,
3844861-3844958,3845313-3845502
Length = 1005
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 249 EIRTGNEVDATKDDAQMSNVIIQREGTSAV 338
E TGN+++ T D+ Q ++ ++EGT A+
Sbjct: 474 ERATGNQLEPTGDEDQEGMILDKKEGTVAI 503
>09_04_0087 + 14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 351 PDLEEQKRLMHVYAEKSKESATGENAGEGVSGQFVVQYDVDRPKDGQ 491
P+ E+KRL KE + GEGVS Q + +P D Q
Sbjct: 1448 PEYLEKKRLKKEKKRMEKEKGKKQKEGEGVSSS--EQKNTAKPSDSQ 1492
>03_06_0571 +
34804375-34804413,34804895-34804961,34806327-34806541,
34806588-34806740
Length = 157
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 208 CTVTVNLGTREPGCK 164
CTV V+LG R PGC+
Sbjct: 41 CTVYVHLGKRMPGCR 55
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 114 YEEMLVRRNDVYQHVVNLHPGSLVP 188
+EE L ++ND HV + +PG +P
Sbjct: 192 FEEKLPKQNDDLLHVTSTYPGGNIP 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,629,019
Number of Sequences: 37544
Number of extensions: 274125
Number of successful extensions: 721
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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