BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G21
(523 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 3.8
BT023809-1|AAZ66316.1| 505|Drosophila melanogaster RE23714p pro... 28 8.8
AY058679-1|AAL13908.1| 539|Drosophila melanogaster LD38816p pro... 28 8.8
AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA... 28 8.8
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 380 ARICGEIERICYRGKCGRRCLRSIC 454
AR CGE +IC G+C RC +C
Sbjct: 1297 ARPCGE-RQICINGRCKERCEGVVC 1320
>BT023809-1|AAZ66316.1| 505|Drosophila melanogaster RE23714p
protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 118 SYVKLNITLEAASTLKVVVKWFESRALAATWA 23
+Y++LN+ E S++KV V W + WA
Sbjct: 250 NYIELNVKKEVNSSVKVKVPWLQIFKSIPAWA 281
>AY058679-1|AAL13908.1| 539|Drosophila melanogaster LD38816p
protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 419 GKCGRRCLRS-ICCTI*CRSTERWT 490
G+ G +CL+S ICC CR E+ T
Sbjct: 495 GQAGAQCLKSSICCNFQCRLLEKET 519
>AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA
protein.
Length = 1319
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 419 GKCGRRCLRS-ICCTI*CRSTERWT 490
G+ G +CL+S ICC CR E+ T
Sbjct: 1111 GQAGAQCLKSSICCNFQCRLLEKET 1135
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,101,759
Number of Sequences: 53049
Number of extensions: 475376
Number of successful extensions: 1319
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -