Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G21
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    25   0.62 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    23   2.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   5.8  

>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 213 KETANISELRVPEIRTGNEVDATKDDAQMSNVIIQREGTSAVITFSPDLEEQKRLMHVYA 392
           K T    E++  +I    +V   +   + S  + +RE    V+T    +EEQ  ++ V  
Sbjct: 142 KSTTTTVEVK-RDIINPEDVIVIRRTGEGSKPLFEREEIKNVLTKINKIEEQDTVLVVNI 200

Query: 393 EKS-KES---ATGENA 428
           EKS KES   AT  N+
Sbjct: 201 EKSGKESKKYATSSNS 216


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 99  IFNLTYEEMLVRRNDVYQHVVNLHPGSLVPKFTVTVHIKETANI 230
           +   T  + L   + ++ H+  L+PG   P F  T   ++ A I
Sbjct: 89  VLGATPRDFLQNLDALHDHLGTLYPGMRAPSFRCTERPEDGALI 132


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 99  IFNLTYEEMLVRRNDVYQHVVNLHPGSLVPKFTVTVHIKETANI 230
           +   T  + L   + ++ H+  L+PG   P F  T   ++ A I
Sbjct: 89  VLGATPRDFLQNLDALHDHLGTLYPGMRAPSFRCTERPEDGALI 132


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +3

Query: 213 KETANISELRVPEIRTGNEVDATKDDAQMSNVIIQREGTSAVITFSPDLEEQKRLMHVYA 392
           K T    E++  +I    +V   +   + S  I +RE    V+T    +EE   ++ V  
Sbjct: 142 KSTTTTVEVK-RDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNI 200

Query: 393 EK----SKESATGENA 428
           EK    SK+ AT  N+
Sbjct: 201 EKSGNESKKYATSSNS 216


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 292 ASSFVASTSFPVLISGTR 239
           AS+F+A  +FP + S TR
Sbjct: 185 ASNFIAMETFPSVYSKTR 202


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 18  GAAHVAAKARDSNHFTTTFNVEA 86
           GA  +  +  D +HF ++FN ++
Sbjct: 65  GALKLRIRCSDVHHFESSFNAQS 87


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 246 PEIRTGNEVDATKDDAQMSNVIIQREGT 329
           P++   N  D   D    +NV+++  GT
Sbjct: 108 PDVLMYNSADEGFDGTYPTNVVVKNNGT 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,855
Number of Sequences: 438
Number of extensions: 3178
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)