Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G16
(468 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 33 0.029
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.62
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 28 0.82
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 1.4
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 27 1.9
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 24 1.9
SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr 2... 26 2.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 4.4
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 4.4
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 4.4
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 25 5.8
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 5.8
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 25 5.8
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 5.8
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.6
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 25 7.6
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 25 7.6
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 7.6
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 32.7 bits (71), Expect = 0.029
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 239 ENEEHVDHIFDTFKTKFNRIYAHKKEHAYR--RAIFKNRLSLILSTNRQNLGYKLTINKF 412
E E +DH F K++FN + K+ AY ++F+ +L N+Q+ + + F
Sbjct: 331 EFESFIDHRFYNTKSRFNSNFEPKERQAYNALSSVFEPHYTLYF--NQQSQEFSILFENF 388
Query: 413 ADRTSRRIDKISRITKTS 466
A D+ S++ +S
Sbjct: 389 ALEKQTSTDESSQVLSSS 406
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 28.3 bits (60), Expect = 0.62
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +2
Query: 137 LNIDDSVFNTEEYNCTEK---PSEIQSEIQNSITIDPENEEHVDHIFDTFKTKFNRIYAH 307
+N++++ T ++ + K P+++ S SI PE+E+ + FD + +KFN
Sbjct: 337 INVEETKKETYKFTRSIKTVIPNKLISNESISILSIPESEKTIYQNFDLYVSKFN---VA 393
Query: 308 KKEHAYRRAIFKNRLSLILSTNRQNLGYKLTI 403
+KE + + +F N S +T +L K T+
Sbjct: 394 RKELS-EKELFNNSFSSSFNTLLASLLVKPTL 424
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 0.82
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 81 LYFNNSYLTGFHVCIFVSYLAHKVCL 4
+YF+ +L GFH + HK+CL
Sbjct: 145 VYFDEEWLNGFHEKVIQKTYDHKLCL 170
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.1 bits (57), Expect = 1.4
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 206 SEIQNSITIDPENEEHVDHIFDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNL 385
SE +++ DP+++E I ++N+ Y H + H R I N LS I+ + N
Sbjct: 1377 SEYVSAMDRDPQDKEFFSAISAVHLGQYNKAYGHIERH---RDILVNDLSSIIGES-YNR 1432
Query: 386 GYKLTI 403
Y + +
Sbjct: 1433 AYGIMV 1438
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 1.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 439 VNSSGSAIGELINSKFVTKILTVG 368
VNS G AIGEL+ S F + G
Sbjct: 175 VNSGGMAIGELLGSAFFIVAIVAG 198
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 272 TFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNLGYKLT 400
T+ T + + + H Y A F+N S++ + Q Y T
Sbjct: 121 TYSTPYTTMNPSNEMHPYPPATFENNYSVLPDHSSQPNAYSFT 163
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 119 TFYNFNLNIDDSVFNTEEYN 178
+F++F L +DS NT+ Y+
Sbjct: 104 SFHSFGLPQEDSQDNTQTYS 123
>SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 227 TIDPENEEHVDHIFDTFKTKFNRIYAHKKEHAYRRAIF 340
++D +H D+ +DT +RI+ + HA R+ F
Sbjct: 107 SVDEPGMDHADYPWDTVPKAVDRIFRSQNWHARRQKQF 144
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 4.4
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 197 EIQSEIQ-NSITIDPENEEHVD 259
EIQ +IQ N+ PENE+H+D
Sbjct: 4064 EIQPDIQENNSQPPPENEDHLD 4085
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 260 HIFDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQN 382
H+FD F +I K+E + A+F L + + N+++
Sbjct: 917 HLFDAFTAHQKKILEQKREESSDVAVFPCVLKTVAAFNKRD 957
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 4.4
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = -1
Query: 216 CISDCISEGFSVQLYSSVLNTESSMFKLKL*KVQTSFSSRAPNQILYFNNSYLTGF 49
C++ + + L V+ + ++FK K + F+ P Q+++F ++ T F
Sbjct: 783 CVASTLIYHYCSMLGCRVIRMQGTLFKKKDALFEKCFAILIPGQLVFFQDATRTKF 838
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 5.8
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 150 TLYLTRKNIIVQKSLQKYNLKYRTQLPLIRKMKNTLTIYSIHSKQNSIEYTHIKKN 317
TLYLT+K+I S+ + ++ IR +++T + Y S + + H++K+
Sbjct: 44 TLYLTKKHIFYVDSVDPKKNSLKIKISDIRDVQHT-SRYFRSSPKIRLSLRHVEKS 98
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 5.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 198 KYNLKYRTQLPLIRKMKNTLTIYSIHSKQNSIEY 299
K+ L+Y+T++ I++ ++L Y HS I Y
Sbjct: 28 KFFLRYKTEISKIQRRTSSLIQYEEHSSAIFIYY 61
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 5.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 78 YFNNSYLTGFHVCIFVSYLAH 16
Y+ S LTG + +F S LAH
Sbjct: 304 YYGMSLLTGSYAVLFASILAH 324
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 25.0 bits (52), Expect = 5.8
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -1
Query: 294 LLNFVLNVSNIWSTCSSFSGSMVIEFCISDCISEGFSVQLYSSVLNTESSMFKLKL*KVQ 115
+LN L+ S+ TC S + F G+ + N + + ++ + +VQ
Sbjct: 508 MLNGCLSTSHFLKTCEKASHMRLDVFAQQWIYGYGYPIFRVVQRFNRKKMIIEMGIDQVQ 567
Query: 114 TSFSSRAP 91
T + RAP
Sbjct: 568 TKEAPRAP 575
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 5.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 257 DHIFDTFKTKFNRIYAHK 310
DH+ D K F +IYA K
Sbjct: 1173 DHVMDVLKQLFRKIYASK 1190
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 24.6 bits (51), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 182 TEKPSEIQSEIQNSITIDPENEEHVDHIFDTF--KTKFN 292
TE +E++S Q +P N + + HI D KT FN
Sbjct: 26 TELIAEVESYQQRYPKQNPTNSQKIRHILDEIYEKTPFN 64
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 24.6 bits (51), Expect = 7.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 275 FKTKFNRIYAHKKEHAYRRAIFKNRLS 355
F ++ R++AHK A R + FK++ S
Sbjct: 171 FAGQYGRVFAHKFYLAARSSYFKSKFS 197
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 24.6 bits (51), Expect = 7.6
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +2
Query: 218 NSITIDPENEEHVDHIFDTFKTKFNRIYAH 307
NS+ + P++E +VD+ ++ + R + H
Sbjct: 180 NSVQVKPKHEHNVDYNSSMYRRRTFRFWVH 209
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 24.6 bits (51), Expect = 7.6
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +3
Query: 159 LTRKNIIVQKSLQKYNLKYRTQLPLIRKMKNTLTIYSIHSKQNSIEYTHIKKNTHTGEQS 338
L RKN +++ L K ++ NTL + + H + +KKN G
Sbjct: 506 LNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHVRAKHIQILENTNQSLKKNLENGRAE 565
Query: 339 SRI 347
R+
Sbjct: 566 FRL 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,020,671
Number of Sequences: 5004
Number of extensions: 43140
Number of successful extensions: 167
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 178394480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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