Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G16
         (468 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048255-1|AAH48255.1|  376|Homo sapiens cathepsin W protein.          36   0.092
AF055903-1|AAC32181.1|  376|Homo sapiens cathepsin W protein.          36   0.092
AF015954-1|AAB82457.1|  376|Homo sapiens lymphopain protein.           36   0.092
AF013611-1|AAB82449.1|  376|Homo sapiens lymphopain protein.           36   0.092
BC132798-1|AAI32799.1|  263|Homo sapiens ret finger protein-like...    29   8.0  
BC132796-1|AAI32797.1|  263|Homo sapiens ret finger protein-like...    29   8.0  
AK122906-1|BAC85513.1|  263|Homo sapiens 22D).  protein.               29   8.0  

>BC048255-1|AAH48255.1|  376|Homo sapiens cathepsin W protein.
          Length = 376

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 266 FDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNLG-YKLTINKFADRTSRRIDK 442
           F  F+ +FNR Y   +EHA+R  IF + L+       ++LG  +  +  F+D T     +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 443 I 445
           +
Sbjct: 102 L 102


>AF055903-1|AAC32181.1|  376|Homo sapiens cathepsin W protein.
          Length = 376

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 266 FDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNLG-YKLTINKFADRTSRRIDK 442
           F  F+ +FNR Y   +EHA+R  IF + L+       ++LG  +  +  F+D T     +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 443 I 445
           +
Sbjct: 102 L 102


>AF015954-1|AAB82457.1|  376|Homo sapiens lymphopain protein.
          Length = 376

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 266 FDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNLG-YKLTINKFADRTSRRIDK 442
           F  F+ +FNR Y   +EHA+R  IF + L+       ++LG  +  +  F+D T     +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 443 I 445
           +
Sbjct: 102 L 102


>AF013611-1|AAB82449.1|  376|Homo sapiens lymphopain protein.
          Length = 376

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 266 FDTFKTKFNRIYAHKKEHAYRRAIFKNRLSLILSTNRQNLG-YKLTINKFADRTSRRIDK 442
           F  F+ +FNR Y   +EHA+R  IF + L+       ++LG  +  +  F+D T     +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 443 I 445
           +
Sbjct: 102 L 102


>BC132798-1|AAI32799.1|  263|Homo sapiens ret finger protein-like 4B
           protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
 Frame = -3

Query: 328 PVCVFFFMCVYSIE----FCFECIE 266
           PVC+ FF C  S+     FCF+CI+
Sbjct: 12  PVCLDFFSCSISLSCTHVFCFDCIQ 36


>BC132796-1|AAI32797.1|  263|Homo sapiens ret finger protein-like 4B
           protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
 Frame = -3

Query: 328 PVCVFFFMCVYSIE----FCFECIE 266
           PVC+ FF C  S+     FCF+CI+
Sbjct: 12  PVCLDFFSCSISLSCTHVFCFDCIQ 36


>AK122906-1|BAC85513.1|  263|Homo sapiens 22D).  protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
 Frame = -3

Query: 328 PVCVFFFMCVYSIE----FCFECIE 266
           PVC+ FF C  S+     FCF+CI+
Sbjct: 12  PVCLDFFSCSISLSCTHVFCFDCIQ 36


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,367,068
Number of Sequences: 237096
Number of extensions: 1325139
Number of successful extensions: 2682
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2679
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)