Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G16
(468 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 0.94
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 0.94
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 0.94
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 0.94
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 0.94
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 2.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 2.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 2.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 2.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 2.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.9
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 6.6
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 6.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.7
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.94
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 PSIILI*TSMTLYLTRKNIIVQKSLQKYNLKYRTQLPL 233
P II ++ T++ N K LQ YN+ Y Q+P+
Sbjct: 79 PKIISSLSNKTIHNNNNNY---KKLQYYNINYIEQIPV 113
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.94
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 PSIILI*TSMTLYLTRKNIIVQKSLQKYNLKYRTQLPL 233
P II ++ T++ N K LQ YN+ Y Q+P+
Sbjct: 79 PKIISSLSNKTIHNNNNNY---KKLQYYNINYIEQIPV 113
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.8 bits (49), Expect = 0.94
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 PSIILI*TSMTLYLTRKNIIVQKSLQKYNLKYRTQLPL 233
P II ++ T++ N K LQ YN+ Y Q+P+
Sbjct: 79 PKIISSLSNKTIHNNNNNY---KKLQYYNINYIEQIPV 113
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.94
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 PSIILI*TSMTLYLTRKNIIVQKSLQKYNLKYRTQLPL 233
P II ++ T++ N K LQ YN+ Y Q+P+
Sbjct: 79 PKIISSLSNKTIHNNNNNY---KKLQYYNINYIEQIPV 113
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.8 bits (49), Expect = 0.94
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 PSIILI*TSMTLYLTRKNIIVQKSLQKYNLKYRTQLPL 233
P II ++ T++ N K LQ YN+ Y Q+P+
Sbjct: 312 PKIISSLSNKTIHNNNNNY---KKLQYYNINYIEQIPV 346
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 108 KKLQYYNINYIEQIPI 123
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 108 KKLQYYNINYIEQIPI 123
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 108 KKLQYYNINYIEQIPI 123
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 108 KKLQYYNINYIEQIPI 123
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 150 TLYLTRKNIIVQKSLQKYNLKYRTQLPLIRK--MKNT 254
T+Y +K + ++K KY LK L RK KNT
Sbjct: 317 TIYRRKKTVPLKKVNSKYILKSTLTPKLARKQFQKNT 353
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 319 KKLQYYNINYIEQIPV 334
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 330 KKLQYYNINYIEQIPV 345
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 330 KKLQYYNINYIEQIPV 345
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 KSLQKYNLKYRTQLPL 233
K LQ YN+ Y Q+P+
Sbjct: 319 KKLQYYNINYIEQIPV 334
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 26 YDTKIQTWKPVKYELLKYN 82
YD+K T P Y L YN
Sbjct: 530 YDSKSSTETPPSYNQLNYN 548
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase
domain protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 29 DTKIQTWKPVKYELLK 76
D ++ WK V+YE+++
Sbjct: 34 DKSLKGWKEVEYEVVR 49
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 128 NFNLNIDDSVFNTEEYN 178
N+N++ D + ++E YN
Sbjct: 106 NYNIDWDKCILSSESYN 122
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 52 FPRLYLCVVFSPQSMS 5
FP LY SPQS S
Sbjct: 392 FPSLYPMATTSPQSQS 407
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 184 CTIIFFRVKYRVID 143
C I++F ++YR I+
Sbjct: 1527 CPILYFTIQYRPIN 1540
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 184 CTIIFFRVKYRVID 143
C I++F ++YR I+
Sbjct: 1523 CPILYFTIQYRPIN 1536
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,672
Number of Sequences: 438
Number of extensions: 3125
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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