Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G15
(417 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 3.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 3.2
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 22 3.2
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 3.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 9.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 9.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 20 9.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 9.7
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 330 NPTPPAVMLAMASDVVQITGNYTLYNLLPRIRKENFFNSFLQWDGIVICF 181
N P VM+ + + + T + + LP + N WDG+ +CF
Sbjct: 327 NAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNV---WDGVCMCF 373
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 330 NPTPPAVMLAMASDVVQITGNYTLYNLLPRIRKENFFNSFLQWDGIVICF 181
N P VM+ + + + T + + LP + N WDG+ +CF
Sbjct: 296 NAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNV---WDGVCMCF 342
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 330 NPTPPAVMLAMASDVVQITGNYTLYNLLPRIRKENFFNSFLQWDGIVICF 181
N P VM+ + + + T + + LP + N WDG+ +CF
Sbjct: 347 NAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNV---WDGVCMCF 393
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 330 NPTPPAVMLAMASDVVQITGNYTLYNLLPRIRKENFFNSFLQWDGIVICF 181
N P VM+ + + + T + + LP + N WDG+ +CF
Sbjct: 296 NAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNV---WDGVCMCF 342
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 3.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 101 DNNKLVNLHFYKLIVYMN 48
D NK +N FY I+Y N
Sbjct: 288 DWNKPINSGFYSTIMYSN 305
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 3.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 101 DNNKLVNLHFYKLIVYMN 48
D NK +N FY I+Y N
Sbjct: 288 DWNKPINSGFYSTIMYSN 305
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.8 bits (44), Expect = 3.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 324 TPPAVMLAMASDVVQITGNYTL 259
TP M SDV+ +T NY L
Sbjct: 10 TPMGAKYLMDSDVIFVTINYRL 31
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 139 NVGTSFNNRLIWQEKADYNAI 201
N+ + F ++ IWQEK + A+
Sbjct: 355 NLWSGFCSQCIWQEKIVFAAV 375
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 131 YIARHTLRIEDNNKL 87
+IA HT +ED+ K+
Sbjct: 493 FIAEHTKMLEDSTKV 507
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 131 YIARHTLRIEDNNKL 87
+IA HT +ED+ K+
Sbjct: 493 FIAEHTKMLEDSTKV 507
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 293 LMWSRSRAITPFIICCPG 240
+ W+ + AI P +I C G
Sbjct: 509 IRWNSAFAIAPAVISCLG 526
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 293 LMWSRSRAITPFIICCPG 240
+ W+ + AI P +I C G
Sbjct: 599 IRWNSAFAIAPAVISCLG 616
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 18 PVCVIVINLLIHIYY 62
PVC + NL+ I Y
Sbjct: 413 PVCFVCFNLMYWIIY 427
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 18 PVCVIVINLLIHIYY 62
PVC + NL+ I Y
Sbjct: 413 PVCFVCFNLMYWIIY 427
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic
acetylcholine receptor beta2subunit protein.
Length = 427
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 18 PVCVIVINLLIH 53
PV ++IN+L+H
Sbjct: 9 PVLFVIINVLLH 20
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 18 PVCVIVINLLIHIYY 62
PVC + NL+ I Y
Sbjct: 351 PVCFVCFNLMYWIIY 365
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,067
Number of Sequences: 438
Number of extensions: 2639
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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