Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G12
(349 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1GXH8 Cluster: CobN/magnesium chelatase; n=1; Methylob... 36 0.15
UniRef50_Q59LI8 Cluster: Potential spliceosomal translocase-like... 33 1.8
UniRef50_Q8A6H7 Cluster: Putative RNA polymerase sigma factor Rp... 32 3.1
UniRef50_Q97JZ6 Cluster: Putative uncharacterized protein CAC112... 31 7.2
UniRef50_A6NKF2 Cluster: Uncharacterized protein ARID3C; n=12; T... 31 7.2
UniRef50_UPI0000EB19F4 Cluster: AT-rich interactive domain-conta... 30 9.5
UniRef50_Q4A8L0 Cluster: Putative uncharacterized protein; n=3; ... 30 9.5
UniRef50_Q5XGD9 Cluster: AT-rich interactive domain-containing p... 30 9.5
UniRef50_Q99856 Cluster: AT-rich interactive domain-containing p... 30 9.5
>UniRef50_Q1GXH8 Cluster: CobN/magnesium chelatase; n=1;
Methylobacillus flagellatus KT|Rep: CobN/magnesium
chelatase - Methylobacillus flagellatus (strain KT / ATCC
51484 / DSM 6875)
Length = 1441
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 89 VKTWTYDELEKVLHDKNFDPELKPYLEEAFNA 184
+K W +DE++KV D + LKP+LEE NA
Sbjct: 1238 IKDWAWDEVKKVYMDDSLKLGLKPFLEEKHNA 1269
>UniRef50_Q59LI8 Cluster: Potential spliceosomal translocase-like
protein Snu114p; n=2; Candida albicans|Rep: Potential
spliceosomal translocase-like protein Snu114p - Candida
albicans (Yeast)
Length = 1022
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 105 TTNWRRCFTTKTLILN*NHT*RRHSMLSFTLCILIKIMAFTLGHKPS 245
TT TT T I N N+ +HS +SF L + KI+ +T+ ++P+
Sbjct: 387 TTTTTTTSTTTTTINNNNNNSLKHSFISFILEPIYKIITYTITNEPT 433
>UniRef50_Q8A6H7 Cluster: Putative RNA polymerase sigma factor RpoS;
n=1; Bacteroides thetaiotaomicron|Rep: Putative RNA
polymerase sigma factor RpoS - Bacteroides
thetaiotaomicron
Length = 405
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 89 VKTWTYDELEKVLHDKNFDPELKPYLEEAFNAIFYS 196
VK+WT +E+ ++ +N+DP K YLE FYS
Sbjct: 176 VKSWTLEEIHQITPHRNYDPN-KKYLESEAGE-FYS 209
>UniRef50_Q97JZ6 Cluster: Putative uncharacterized protein CAC1126;
n=1; Clostridium acetobutylicum|Rep: Putative
uncharacterized protein CAC1126 - Clostridium
acetobutylicum
Length = 197
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 143 DPELKPYLEEAFNAIFYSMYTN*NHGIYTRP 235
D E PY+EE FN+ +Y+ T N IY+RP
Sbjct: 95 DIENNPYIEEYFNSSYYNK-TRDNMKIYSRP 124
>UniRef50_A6NKF2 Cluster: Uncharacterized protein ARID3C; n=12;
Theria|Rep: Uncharacterized protein ARID3C - Homo
sapiens (Human)
Length = 412
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 98 WTYDELEKVLHDKNFDPELKPYLEEAFN 181
WTY+E K L++ + DP+ K +L++ F+
Sbjct: 98 WTYEEQFKQLYELDADPKRKEFLDDLFS 125
>UniRef50_UPI0000EB19F4 Cluster: AT-rich interactive
domain-containing protein 3A (ARID domain- containing
protein 3A) (B-cell regulator of IgH transcription)
(Bright) (E2F-binding protein 1).; n=1; Canis lupus
familiaris|Rep: AT-rich interactive domain-containing
protein 3A (ARID domain- containing protein 3A) (B-cell
regulator of IgH transcription) (Bright) (E2F-binding
protein 1). - Canis familiaris
Length = 564
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 98 WTYDELEKVLHDKNFDPELKPYLEEAFN 181
WTY+E K L++ + DP+ K +L++ F+
Sbjct: 213 WTYEEQFKQLYELDGDPKRKEFLDDLFS 240
>UniRef50_Q4A8L0 Cluster: Putative uncharacterized protein; n=3;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 7448)
Length = 226
Score = 30.3 bits (65), Expect = 9.5
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 119 KVLHDKNFDPELKPYLEEAF 178
+++H++NF+P++ P LE+AF
Sbjct: 97 QIMHEQNFEPKIFPILEQAF 116
>UniRef50_Q5XGD9 Cluster: AT-rich interactive domain-containing
protein 3A; n=11; Euteleostomi|Rep: AT-rich interactive
domain-containing protein 3A - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 541
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 98 WTYDELEKVLHDKNFDPELKPYLEEAFN 181
WTY+E K L++ + DP+ K +L++ F+
Sbjct: 197 WTYEEQFKQLYELDGDPKRKEFLDDLFS 224
>UniRef50_Q99856 Cluster: AT-rich interactive domain-containing
protein 3A; n=10; Amniota|Rep: AT-rich interactive
domain-containing protein 3A - Homo sapiens (Human)
Length = 593
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 98 WTYDELEKVLHDKNFDPELKPYLEEAFN 181
WTY+E K L++ + DP+ K +L++ F+
Sbjct: 223 WTYEEQFKQLYELDGDPKRKEFLDDLFS 250
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,459,914
Number of Sequences: 1657284
Number of extensions: 4866198
Number of successful extensions: 8977
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8977
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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